Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2133 | 6622;6623;6624 | chr2:178775467;178775466;178775465 | chr2:179640194;179640193;179640192 |
N2AB | 2133 | 6622;6623;6624 | chr2:178775467;178775466;178775465 | chr2:179640194;179640193;179640192 |
N2A | 2133 | 6622;6623;6624 | chr2:178775467;178775466;178775465 | chr2:179640194;179640193;179640192 |
N2B | 2087 | 6484;6485;6486 | chr2:178775467;178775466;178775465 | chr2:179640194;179640193;179640192 |
Novex-1 | 2087 | 6484;6485;6486 | chr2:178775467;178775466;178775465 | chr2:179640194;179640193;179640192 |
Novex-2 | 2087 | 6484;6485;6486 | chr2:178775467;178775466;178775465 | chr2:179640194;179640193;179640192 |
Novex-3 | 2133 | 6622;6623;6624 | chr2:178775467;178775466;178775465 | chr2:179640194;179640193;179640192 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.997 | N | 0.521 | 0.272 | 0.615660705115 | gnomAD-4.0.0 | 1.59071E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77608E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6428 | likely_pathogenic | 0.7418 | pathogenic | -2.146 | Highly Destabilizing | 0.999 | D | 0.555 | neutral | D | 0.536026498 | None | None | N |
V/C | 0.9175 | likely_pathogenic | 0.9332 | pathogenic | -1.597 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
V/D | 0.9425 | likely_pathogenic | 0.9671 | pathogenic | -3.032 | Highly Destabilizing | 1.0 | D | 0.799 | deleterious | D | 0.544054325 | None | None | N |
V/E | 0.8098 | likely_pathogenic | 0.8825 | pathogenic | -2.868 | Highly Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
V/F | 0.5607 | ambiguous | 0.686 | pathogenic | -1.232 | Destabilizing | 1.0 | D | 0.799 | deleterious | D | 0.540691374 | None | None | N |
V/G | 0.814 | likely_pathogenic | 0.8816 | pathogenic | -2.567 | Highly Destabilizing | 1.0 | D | 0.764 | deleterious | N | 0.500841304 | None | None | N |
V/H | 0.9281 | likely_pathogenic | 0.9576 | pathogenic | -2.279 | Highly Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
V/I | 0.0927 | likely_benign | 0.1066 | benign | -0.978 | Destabilizing | 0.997 | D | 0.521 | neutral | N | 0.482369794 | None | None | N |
V/K | 0.8915 | likely_pathogenic | 0.9295 | pathogenic | -1.737 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
V/L | 0.5594 | ambiguous | 0.6848 | pathogenic | -0.978 | Destabilizing | 0.997 | D | 0.539 | neutral | N | 0.496373883 | None | None | N |
V/M | 0.4037 | ambiguous | 0.5214 | ambiguous | -1.062 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
V/N | 0.8331 | likely_pathogenic | 0.8955 | pathogenic | -1.967 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
V/P | 0.9963 | likely_pathogenic | 0.997 | pathogenic | -1.345 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
V/Q | 0.809 | likely_pathogenic | 0.8775 | pathogenic | -1.897 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
V/R | 0.8441 | likely_pathogenic | 0.8926 | pathogenic | -1.439 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
V/S | 0.7273 | likely_pathogenic | 0.8178 | pathogenic | -2.42 | Highly Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
V/T | 0.4832 | ambiguous | 0.5796 | pathogenic | -2.157 | Highly Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | N |
V/W | 0.979 | likely_pathogenic | 0.988 | pathogenic | -1.754 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
V/Y | 0.9011 | likely_pathogenic | 0.9365 | pathogenic | -1.461 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.