Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21341 | 64246;64247;64248 | chr2:178587190;178587189;178587188 | chr2:179451917;179451916;179451915 |
N2AB | 19700 | 59323;59324;59325 | chr2:178587190;178587189;178587188 | chr2:179451917;179451916;179451915 |
N2A | 18773 | 56542;56543;56544 | chr2:178587190;178587189;178587188 | chr2:179451917;179451916;179451915 |
N2B | 12276 | 37051;37052;37053 | chr2:178587190;178587189;178587188 | chr2:179451917;179451916;179451915 |
Novex-1 | 12401 | 37426;37427;37428 | chr2:178587190;178587189;178587188 | chr2:179451917;179451916;179451915 |
Novex-2 | 12468 | 37627;37628;37629 | chr2:178587190;178587189;178587188 | chr2:179451917;179451916;179451915 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.977 | N | 0.771 | 0.289 | 0.326074293725 | gnomAD-4.0.0 | 1.59221E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43295E-05 | 0 |
T/S | None | None | 0.98 | N | 0.727 | 0.255 | 0.245101548738 | gnomAD-4.0.0 | 4.8013E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25002E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1103 | likely_benign | 0.1212 | benign | -1.846 | Destabilizing | 0.91 | D | 0.713 | prob.delet. | N | 0.452755242 | None | None | N |
T/C | 0.2842 | likely_benign | 0.3114 | benign | -1.59 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
T/D | 0.8192 | likely_pathogenic | 0.8442 | pathogenic | -2.347 | Highly Destabilizing | 0.996 | D | 0.77 | deleterious | None | None | None | None | N |
T/E | 0.6651 | likely_pathogenic | 0.6689 | pathogenic | -2.137 | Highly Destabilizing | 0.991 | D | 0.768 | deleterious | None | None | None | None | N |
T/F | 0.3591 | ambiguous | 0.4067 | ambiguous | -1.306 | Destabilizing | 0.991 | D | 0.805 | deleterious | None | None | None | None | N |
T/G | 0.3659 | ambiguous | 0.3988 | ambiguous | -2.199 | Highly Destabilizing | 0.985 | D | 0.763 | deleterious | None | None | None | None | N |
T/H | 0.4519 | ambiguous | 0.4824 | ambiguous | -2.002 | Highly Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
T/I | 0.174 | likely_benign | 0.1748 | benign | -0.904 | Destabilizing | 0.977 | D | 0.771 | deleterious | N | 0.424955352 | None | None | N |
T/K | 0.4986 | ambiguous | 0.5039 | ambiguous | -1.154 | Destabilizing | 0.942 | D | 0.768 | deleterious | None | None | None | None | N |
T/L | 0.0935 | likely_benign | 0.1011 | benign | -0.904 | Destabilizing | 0.871 | D | 0.725 | prob.delet. | None | None | None | None | N |
T/M | 0.0754 | likely_benign | 0.0805 | benign | -1.138 | Destabilizing | 0.746 | D | 0.569 | neutral | None | None | None | None | N |
T/N | 0.2524 | likely_benign | 0.2914 | benign | -1.765 | Destabilizing | 0.994 | D | 0.771 | deleterious | N | 0.46693824 | None | None | N |
T/P | 0.8919 | likely_pathogenic | 0.9268 | pathogenic | -1.194 | Destabilizing | 0.998 | D | 0.787 | deleterious | N | 0.474700147 | None | None | N |
T/Q | 0.4048 | ambiguous | 0.4096 | ambiguous | -1.562 | Destabilizing | 0.991 | D | 0.775 | deleterious | None | None | None | None | N |
T/R | 0.3866 | ambiguous | 0.4021 | ambiguous | -1.203 | Destabilizing | 0.191 | N | 0.587 | neutral | None | None | None | None | N |
T/S | 0.1428 | likely_benign | 0.1629 | benign | -1.958 | Destabilizing | 0.98 | D | 0.727 | prob.delet. | N | 0.43940473 | None | None | N |
T/V | 0.1326 | likely_benign | 0.1351 | benign | -1.194 | Destabilizing | 0.942 | D | 0.727 | prob.delet. | None | None | None | None | N |
T/W | 0.7284 | likely_pathogenic | 0.7536 | pathogenic | -1.441 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
T/Y | 0.4253 | ambiguous | 0.454 | ambiguous | -1.138 | Destabilizing | 0.999 | D | 0.808 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.