Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21345 | 64258;64259;64260 | chr2:178587178;178587177;178587176 | chr2:179451905;179451904;179451903 |
N2AB | 19704 | 59335;59336;59337 | chr2:178587178;178587177;178587176 | chr2:179451905;179451904;179451903 |
N2A | 18777 | 56554;56555;56556 | chr2:178587178;178587177;178587176 | chr2:179451905;179451904;179451903 |
N2B | 12280 | 37063;37064;37065 | chr2:178587178;178587177;178587176 | chr2:179451905;179451904;179451903 |
Novex-1 | 12405 | 37438;37439;37440 | chr2:178587178;178587177;178587176 | chr2:179451905;179451904;179451903 |
Novex-2 | 12472 | 37639;37640;37641 | chr2:178587178;178587177;178587176 | chr2:179451905;179451904;179451903 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs776495338 | 0.594 | 0.438 | N | 0.205 | 0.253 | 0.225215365344 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 9.28E-05 | 0 | 1.65673E-04 |
E/K | rs776495338 | 0.594 | 0.438 | N | 0.205 | 0.253 | 0.225215365344 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | I | None | 9.66E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs776495338 | 0.594 | 0.438 | N | 0.205 | 0.253 | 0.225215365344 | gnomAD-4.0.0 | 1.42579E-05 | None | None | None | None | I | None | 9.35354E-05 | 0 | None | 0 | 0 | None | 3.12383E-05 | 0 | 9.32641E-06 | 3.29417E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2213 | likely_benign | 0.2588 | benign | -0.508 | Destabilizing | 0.961 | D | 0.539 | neutral | N | 0.4574117 | None | None | I |
E/C | 0.8879 | likely_pathogenic | 0.9212 | pathogenic | -0.193 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
E/D | 0.1848 | likely_benign | 0.2194 | benign | -0.405 | Destabilizing | 0.98 | D | 0.432 | neutral | N | 0.437633861 | None | None | I |
E/F | 0.904 | likely_pathogenic | 0.934 | pathogenic | -0.289 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | I |
E/G | 0.3747 | ambiguous | 0.4446 | ambiguous | -0.697 | Destabilizing | 0.98 | D | 0.569 | neutral | N | 0.504679998 | None | None | I |
E/H | 0.6648 | likely_pathogenic | 0.735 | pathogenic | 0.098 | Stabilizing | 0.999 | D | 0.4 | neutral | None | None | None | None | I |
E/I | 0.3941 | ambiguous | 0.4561 | ambiguous | -0.042 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | I |
E/K | 0.218 | likely_benign | 0.2811 | benign | 0.303 | Stabilizing | 0.438 | N | 0.205 | neutral | N | 0.411332694 | None | None | I |
E/L | 0.5538 | ambiguous | 0.626 | pathogenic | -0.042 | Destabilizing | 0.996 | D | 0.569 | neutral | None | None | None | None | I |
E/M | 0.565 | likely_pathogenic | 0.6442 | pathogenic | 0.022 | Stabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | I |
E/N | 0.375 | ambiguous | 0.4544 | ambiguous | -0.161 | Destabilizing | 0.985 | D | 0.438 | neutral | None | None | None | None | I |
E/P | 0.7193 | likely_pathogenic | 0.6866 | pathogenic | -0.178 | Destabilizing | 0.999 | D | 0.5 | neutral | None | None | None | None | I |
E/Q | 0.1848 | likely_benign | 0.2154 | benign | -0.108 | Destabilizing | 0.984 | D | 0.429 | neutral | N | 0.472015793 | None | None | I |
E/R | 0.3961 | ambiguous | 0.4707 | ambiguous | 0.574 | Stabilizing | 0.942 | D | 0.457 | neutral | None | None | None | None | I |
E/S | 0.3084 | likely_benign | 0.3715 | ambiguous | -0.285 | Destabilizing | 0.97 | D | 0.477 | neutral | None | None | None | None | I |
E/T | 0.2901 | likely_benign | 0.3488 | ambiguous | -0.117 | Destabilizing | 0.985 | D | 0.523 | neutral | None | None | None | None | I |
E/V | 0.2865 | likely_benign | 0.3343 | benign | -0.178 | Destabilizing | 0.994 | D | 0.516 | neutral | N | 0.490948271 | None | None | I |
E/W | 0.9781 | likely_pathogenic | 0.9858 | pathogenic | -0.083 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
E/Y | 0.8289 | likely_pathogenic | 0.874 | pathogenic | -0.033 | Destabilizing | 0.999 | D | 0.636 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.