Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21354 | 64285;64286;64287 | chr2:178587151;178587150;178587149 | chr2:179451878;179451877;179451876 |
N2AB | 19713 | 59362;59363;59364 | chr2:178587151;178587150;178587149 | chr2:179451878;179451877;179451876 |
N2A | 18786 | 56581;56582;56583 | chr2:178587151;178587150;178587149 | chr2:179451878;179451877;179451876 |
N2B | 12289 | 37090;37091;37092 | chr2:178587151;178587150;178587149 | chr2:179451878;179451877;179451876 |
Novex-1 | 12414 | 37465;37466;37467 | chr2:178587151;178587150;178587149 | chr2:179451878;179451877;179451876 |
Novex-2 | 12481 | 37666;37667;37668 | chr2:178587151;178587150;178587149 | chr2:179451878;179451877;179451876 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | N | 0.219 | 0.128 | 0.119812018005 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1173 | likely_benign | 0.1503 | benign | -1.605 | Destabilizing | 0.002 | N | 0.532 | neutral | N | 0.419680031 | None | None | N |
V/C | 0.4455 | ambiguous | 0.5087 | ambiguous | -0.903 | Destabilizing | 0.439 | N | 0.641 | neutral | None | None | None | None | N |
V/D | 0.3574 | ambiguous | 0.4344 | ambiguous | -2.22 | Highly Destabilizing | 0.026 | N | 0.705 | prob.delet. | N | 0.489310688 | None | None | N |
V/E | 0.3602 | ambiguous | 0.4267 | ambiguous | -2.054 | Highly Destabilizing | 0.035 | N | 0.688 | prob.delet. | None | None | None | None | N |
V/F | 0.1196 | likely_benign | 0.1508 | benign | -0.95 | Destabilizing | 0.087 | N | 0.774 | deleterious | N | 0.459161139 | None | None | N |
V/G | 0.1645 | likely_benign | 0.2085 | benign | -2.069 | Highly Destabilizing | 0.026 | N | 0.647 | neutral | N | 0.518940162 | None | None | N |
V/H | 0.451 | ambiguous | 0.5173 | ambiguous | -1.917 | Destabilizing | 0.439 | N | 0.739 | deleterious | None | None | None | None | N |
V/I | 0.0607 | likely_benign | 0.0644 | benign | -0.345 | Destabilizing | None | N | 0.219 | neutral | N | 0.421584186 | None | None | N |
V/K | 0.4346 | ambiguous | 0.4809 | ambiguous | -1.462 | Destabilizing | 0.035 | N | 0.683 | prob.neutral | None | None | None | None | N |
V/L | 0.0954 | likely_benign | 0.1086 | benign | -0.345 | Destabilizing | 0.001 | N | 0.529 | neutral | N | 0.369405927 | None | None | N |
V/M | 0.0946 | likely_benign | 0.1114 | benign | -0.224 | Destabilizing | 0.112 | N | 0.599 | neutral | None | None | None | None | N |
V/N | 0.1741 | likely_benign | 0.224 | benign | -1.612 | Destabilizing | 0.035 | N | 0.725 | deleterious | None | None | None | None | N |
V/P | 0.6117 | likely_pathogenic | 0.7333 | pathogenic | -0.736 | Destabilizing | 0.068 | N | 0.735 | deleterious | None | None | None | None | N |
V/Q | 0.3477 | ambiguous | 0.3989 | ambiguous | -1.539 | Destabilizing | 0.204 | N | 0.737 | deleterious | None | None | None | None | N |
V/R | 0.4151 | ambiguous | 0.4405 | ambiguous | -1.223 | Destabilizing | 0.112 | N | 0.783 | deleterious | None | None | None | None | N |
V/S | 0.117 | likely_benign | 0.1459 | benign | -2.118 | Highly Destabilizing | 0.001 | N | 0.566 | neutral | None | None | None | None | N |
V/T | 0.1076 | likely_benign | 0.1248 | benign | -1.833 | Destabilizing | None | N | 0.267 | neutral | None | None | None | None | N |
V/W | 0.7043 | likely_pathogenic | 0.7639 | pathogenic | -1.51 | Destabilizing | 0.747 | D | 0.757 | deleterious | None | None | None | None | N |
V/Y | 0.4098 | ambiguous | 0.4747 | ambiguous | -1.063 | Destabilizing | 0.204 | N | 0.731 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.