Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2139164396;64397;64398 chr2:178586730;178586729;178586728chr2:179451457;179451456;179451455
N2AB1975059473;59474;59475 chr2:178586730;178586729;178586728chr2:179451457;179451456;179451455
N2A1882356692;56693;56694 chr2:178586730;178586729;178586728chr2:179451457;179451456;179451455
N2B1232637201;37202;37203 chr2:178586730;178586729;178586728chr2:179451457;179451456;179451455
Novex-11245137576;37577;37578 chr2:178586730;178586729;178586728chr2:179451457;179451456;179451455
Novex-21251837777;37778;37779 chr2:178586730;178586729;178586728chr2:179451457;179451456;179451455
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTA
  • RefSeq wild type template codon: GAT
  • Domain: Fn3-43
  • Domain position: 26
  • Structural Position: 28
  • Q(SASA): 0.8469
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/R None None 1.0 N 0.704 0.469 0.682517699708 gnomAD-4.0.0 1.59276E-06 None None None None I None 0 0 None 0 0 None 0 0 0 1.43332E-05 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.4025 ambiguous 0.3219 benign -0.557 Destabilizing 0.999 D 0.619 neutral None None None None I
L/C 0.8264 likely_pathogenic 0.7654 pathogenic -0.496 Destabilizing 1.0 D 0.613 neutral None None None None I
L/D 0.8562 likely_pathogenic 0.7764 pathogenic -0.473 Destabilizing 1.0 D 0.697 prob.neutral None None None None I
L/E 0.5358 ambiguous 0.4292 ambiguous -0.574 Destabilizing 1.0 D 0.727 prob.delet. None None None None I
L/F 0.363 ambiguous 0.2958 benign -0.648 Destabilizing 1.0 D 0.645 neutral None None None None I
L/G 0.7632 likely_pathogenic 0.6705 pathogenic -0.703 Destabilizing 1.0 D 0.729 prob.delet. None None None None I
L/H 0.5628 ambiguous 0.4659 ambiguous -0.014 Destabilizing 1.0 D 0.711 prob.delet. None None None None I
L/I 0.1724 likely_benign 0.1473 benign -0.295 Destabilizing 0.999 D 0.471 neutral N 0.480251275 None None I
L/K 0.4985 ambiguous 0.3984 ambiguous -0.357 Destabilizing 1.0 D 0.697 prob.neutral None None None None I
L/M 0.1947 likely_benign 0.1676 benign -0.392 Destabilizing 1.0 D 0.595 neutral None None None None I
L/N 0.6233 likely_pathogenic 0.5064 ambiguous -0.106 Destabilizing 1.0 D 0.699 prob.neutral None None None None I
L/P 0.5764 likely_pathogenic 0.4903 ambiguous -0.35 Destabilizing 1.0 D 0.703 prob.neutral N 0.471514361 None None I
L/Q 0.2829 likely_benign 0.2192 benign -0.362 Destabilizing 1.0 D 0.678 prob.neutral N 0.488542684 None None I
L/R 0.483 ambiguous 0.4009 ambiguous 0.233 Stabilizing 1.0 D 0.704 prob.neutral N 0.471514361 None None I
L/S 0.5324 ambiguous 0.4241 ambiguous -0.471 Destabilizing 1.0 D 0.701 prob.neutral None None None None I
L/T 0.4647 ambiguous 0.3718 ambiguous -0.471 Destabilizing 1.0 D 0.689 prob.neutral None None None None I
L/V 0.1602 likely_benign 0.1401 benign -0.35 Destabilizing 0.999 D 0.537 neutral N 0.46787941 None None I
L/W 0.5599 ambiguous 0.4927 ambiguous -0.673 Destabilizing 1.0 D 0.701 prob.neutral None None None None I
L/Y 0.5994 likely_pathogenic 0.5131 ambiguous -0.424 Destabilizing 1.0 D 0.664 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.