Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21391 | 64396;64397;64398 | chr2:178586730;178586729;178586728 | chr2:179451457;179451456;179451455 |
N2AB | 19750 | 59473;59474;59475 | chr2:178586730;178586729;178586728 | chr2:179451457;179451456;179451455 |
N2A | 18823 | 56692;56693;56694 | chr2:178586730;178586729;178586728 | chr2:179451457;179451456;179451455 |
N2B | 12326 | 37201;37202;37203 | chr2:178586730;178586729;178586728 | chr2:179451457;179451456;179451455 |
Novex-1 | 12451 | 37576;37577;37578 | chr2:178586730;178586729;178586728 | chr2:179451457;179451456;179451455 |
Novex-2 | 12518 | 37777;37778;37779 | chr2:178586730;178586729;178586728 | chr2:179451457;179451456;179451455 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | None | None | 1.0 | N | 0.704 | 0.469 | 0.682517699708 | gnomAD-4.0.0 | 1.59276E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43332E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4025 | ambiguous | 0.3219 | benign | -0.557 | Destabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | I |
L/C | 0.8264 | likely_pathogenic | 0.7654 | pathogenic | -0.496 | Destabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | I |
L/D | 0.8562 | likely_pathogenic | 0.7764 | pathogenic | -0.473 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
L/E | 0.5358 | ambiguous | 0.4292 | ambiguous | -0.574 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
L/F | 0.363 | ambiguous | 0.2958 | benign | -0.648 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | I |
L/G | 0.7632 | likely_pathogenic | 0.6705 | pathogenic | -0.703 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
L/H | 0.5628 | ambiguous | 0.4659 | ambiguous | -0.014 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
L/I | 0.1724 | likely_benign | 0.1473 | benign | -0.295 | Destabilizing | 0.999 | D | 0.471 | neutral | N | 0.480251275 | None | None | I |
L/K | 0.4985 | ambiguous | 0.3984 | ambiguous | -0.357 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
L/M | 0.1947 | likely_benign | 0.1676 | benign | -0.392 | Destabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | I |
L/N | 0.6233 | likely_pathogenic | 0.5064 | ambiguous | -0.106 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
L/P | 0.5764 | likely_pathogenic | 0.4903 | ambiguous | -0.35 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | N | 0.471514361 | None | None | I |
L/Q | 0.2829 | likely_benign | 0.2192 | benign | -0.362 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | N | 0.488542684 | None | None | I |
L/R | 0.483 | ambiguous | 0.4009 | ambiguous | 0.233 | Stabilizing | 1.0 | D | 0.704 | prob.neutral | N | 0.471514361 | None | None | I |
L/S | 0.5324 | ambiguous | 0.4241 | ambiguous | -0.471 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
L/T | 0.4647 | ambiguous | 0.3718 | ambiguous | -0.471 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
L/V | 0.1602 | likely_benign | 0.1401 | benign | -0.35 | Destabilizing | 0.999 | D | 0.537 | neutral | N | 0.46787941 | None | None | I |
L/W | 0.5599 | ambiguous | 0.4927 | ambiguous | -0.673 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
L/Y | 0.5994 | likely_pathogenic | 0.5131 | ambiguous | -0.424 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.