Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21408 | 64447;64448;64449 | chr2:178586679;178586678;178586677 | chr2:179451406;179451405;179451404 |
N2AB | 19767 | 59524;59525;59526 | chr2:178586679;178586678;178586677 | chr2:179451406;179451405;179451404 |
N2A | 18840 | 56743;56744;56745 | chr2:178586679;178586678;178586677 | chr2:179451406;179451405;179451404 |
N2B | 12343 | 37252;37253;37254 | chr2:178586679;178586678;178586677 | chr2:179451406;179451405;179451404 |
Novex-1 | 12468 | 37627;37628;37629 | chr2:178586679;178586678;178586677 | chr2:179451406;179451405;179451404 |
Novex-2 | 12535 | 37828;37829;37830 | chr2:178586679;178586678;178586677 | chr2:179451406;179451405;179451404 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.896 | N | 0.53 | 0.231 | 0.28058544554 | gnomAD-4.0.0 | 1.59261E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86102E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1442 | likely_benign | 0.1324 | benign | -0.633 | Destabilizing | 0.896 | D | 0.514 | neutral | N | 0.465551181 | None | None | N |
E/C | 0.9076 | likely_pathogenic | 0.8757 | pathogenic | -0.418 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/D | 0.1348 | likely_benign | 0.132 | benign | -0.876 | Destabilizing | 0.011 | N | 0.165 | neutral | N | 0.466167256 | None | None | N |
E/F | 0.8389 | likely_pathogenic | 0.7854 | pathogenic | -0.208 | Destabilizing | 0.988 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/G | 0.215 | likely_benign | 0.1843 | benign | -0.943 | Destabilizing | 0.896 | D | 0.62 | neutral | N | 0.466572688 | None | None | N |
E/H | 0.7432 | likely_pathogenic | 0.6731 | pathogenic | -0.38 | Destabilizing | 0.159 | N | 0.331 | neutral | None | None | None | None | N |
E/I | 0.3728 | ambiguous | 0.3233 | benign | 0.193 | Stabilizing | 0.988 | D | 0.732 | prob.delet. | None | None | None | None | N |
E/K | 0.3953 | ambiguous | 0.3212 | benign | -0.475 | Destabilizing | 0.896 | D | 0.53 | neutral | N | 0.450851087 | None | None | N |
E/L | 0.4389 | ambiguous | 0.3825 | ambiguous | 0.193 | Stabilizing | 0.976 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/M | 0.495 | ambiguous | 0.4415 | ambiguous | 0.414 | Stabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/N | 0.3703 | ambiguous | 0.3229 | benign | -0.826 | Destabilizing | 0.851 | D | 0.504 | neutral | None | None | None | None | N |
E/P | 0.6096 | likely_pathogenic | 0.5683 | pathogenic | -0.061 | Destabilizing | 0.988 | D | 0.586 | neutral | None | None | None | None | N |
E/Q | 0.3028 | likely_benign | 0.2547 | benign | -0.724 | Destabilizing | 0.968 | D | 0.52 | neutral | N | 0.504589572 | None | None | N |
E/R | 0.5987 | likely_pathogenic | 0.5156 | ambiguous | -0.181 | Destabilizing | 0.976 | D | 0.549 | neutral | None | None | None | None | N |
E/S | 0.2544 | likely_benign | 0.2255 | benign | -1.067 | Destabilizing | 0.919 | D | 0.5 | neutral | None | None | None | None | N |
E/T | 0.2658 | likely_benign | 0.2323 | benign | -0.822 | Destabilizing | 0.988 | D | 0.509 | neutral | None | None | None | None | N |
E/V | 0.226 | likely_benign | 0.2023 | benign | -0.061 | Destabilizing | 0.984 | D | 0.693 | prob.neutral | N | 0.445098551 | None | None | N |
E/W | 0.9407 | likely_pathogenic | 0.9144 | pathogenic | -0.012 | Destabilizing | 0.999 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/Y | 0.7555 | likely_pathogenic | 0.6906 | pathogenic | 0.014 | Stabilizing | 0.976 | D | 0.701 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.