Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21429 | 64510;64511;64512 | chr2:178586616;178586615;178586614 | chr2:179451343;179451342;179451341 |
N2AB | 19788 | 59587;59588;59589 | chr2:178586616;178586615;178586614 | chr2:179451343;179451342;179451341 |
N2A | 18861 | 56806;56807;56808 | chr2:178586616;178586615;178586614 | chr2:179451343;179451342;179451341 |
N2B | 12364 | 37315;37316;37317 | chr2:178586616;178586615;178586614 | chr2:179451343;179451342;179451341 |
Novex-1 | 12489 | 37690;37691;37692 | chr2:178586616;178586615;178586614 | chr2:179451343;179451342;179451341 |
Novex-2 | 12556 | 37891;37892;37893 | chr2:178586616;178586615;178586614 | chr2:179451343;179451342;179451341 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1276697618 | -0.238 | 0.012 | N | 0.401 | 0.102 | 0.208000267992 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14837E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs1276697618 | -0.238 | 0.012 | N | 0.401 | 0.102 | 0.208000267992 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs1276697618 | -0.238 | 0.012 | N | 0.401 | 0.102 | 0.208000267992 | gnomAD-4.0.0 | 2.56412E-06 | None | None | None | None | N | None | 3.38547E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0753 | likely_benign | 0.0843 | benign | -0.801 | Destabilizing | None | N | 0.108 | neutral | N | 0.442831824 | None | None | N |
T/C | 0.3249 | likely_benign | 0.4138 | ambiguous | -0.482 | Destabilizing | 0.356 | N | 0.483 | neutral | None | None | None | None | N |
T/D | 0.3875 | ambiguous | 0.4239 | ambiguous | 0.416 | Stabilizing | 0.016 | N | 0.423 | neutral | None | None | None | None | N |
T/E | 0.3094 | likely_benign | 0.3039 | benign | 0.41 | Stabilizing | 0.016 | N | 0.387 | neutral | None | None | None | None | N |
T/F | 0.2689 | likely_benign | 0.3049 | benign | -1.066 | Destabilizing | 0.356 | N | 0.59 | neutral | None | None | None | None | N |
T/G | 0.1715 | likely_benign | 0.2293 | benign | -1.016 | Destabilizing | 0.016 | N | 0.343 | neutral | None | None | None | None | N |
T/H | 0.243 | likely_benign | 0.2715 | benign | -1.131 | Destabilizing | None | N | 0.312 | neutral | None | None | None | None | N |
T/I | 0.1702 | likely_benign | 0.1746 | benign | -0.329 | Destabilizing | 0.012 | N | 0.401 | neutral | N | 0.502688204 | None | None | N |
T/K | 0.2218 | likely_benign | 0.2046 | benign | -0.417 | Destabilizing | 0.016 | N | 0.418 | neutral | None | None | None | None | N |
T/L | 0.1031 | likely_benign | 0.1078 | benign | -0.329 | Destabilizing | 0.016 | N | 0.356 | neutral | None | None | None | None | N |
T/M | 0.0965 | likely_benign | 0.0989 | benign | -0.214 | Destabilizing | 0.356 | N | 0.495 | neutral | None | None | None | None | N |
T/N | 0.1224 | likely_benign | 0.1357 | benign | -0.375 | Destabilizing | None | N | 0.14 | neutral | N | 0.45399018 | None | None | N |
T/P | 0.1087 | likely_benign | 0.1368 | benign | -0.455 | Destabilizing | 0.055 | N | 0.491 | neutral | N | 0.474000093 | None | None | N |
T/Q | 0.2292 | likely_benign | 0.2335 | benign | -0.468 | Destabilizing | 0.072 | N | 0.525 | neutral | None | None | None | None | N |
T/R | 0.2285 | likely_benign | 0.2162 | benign | -0.21 | Destabilizing | 0.072 | N | 0.445 | neutral | None | None | None | None | N |
T/S | 0.0923 | likely_benign | 0.1065 | benign | -0.731 | Destabilizing | None | N | 0.148 | neutral | N | 0.421531045 | None | None | N |
T/V | 0.1151 | likely_benign | 0.1132 | benign | -0.455 | Destabilizing | None | N | 0.113 | neutral | None | None | None | None | N |
T/W | 0.5708 | likely_pathogenic | 0.6431 | pathogenic | -1.009 | Destabilizing | 0.864 | D | 0.508 | neutral | None | None | None | None | N |
T/Y | 0.286 | likely_benign | 0.3311 | benign | -0.748 | Destabilizing | 0.12 | N | 0.588 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.