Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21446 | 64561;64562;64563 | chr2:178586565;178586564;178586563 | chr2:179451292;179451291;179451290 |
N2AB | 19805 | 59638;59639;59640 | chr2:178586565;178586564;178586563 | chr2:179451292;179451291;179451290 |
N2A | 18878 | 56857;56858;56859 | chr2:178586565;178586564;178586563 | chr2:179451292;179451291;179451290 |
N2B | 12381 | 37366;37367;37368 | chr2:178586565;178586564;178586563 | chr2:179451292;179451291;179451290 |
Novex-1 | 12506 | 37741;37742;37743 | chr2:178586565;178586564;178586563 | chr2:179451292;179451291;179451290 |
Novex-2 | 12573 | 37942;37943;37944 | chr2:178586565;178586564;178586563 | chr2:179451292;179451291;179451290 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.645 | N | 0.358 | 0.218 | 0.455909487837 | gnomAD-4.0.0 | 1.59252E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4332E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4805 | ambiguous | 0.463 | ambiguous | -0.709 | Destabilizing | 0.985 | D | 0.357 | neutral | None | None | None | None | I |
A/D | 0.3857 | ambiguous | 0.3397 | benign | -0.581 | Destabilizing | 0.864 | D | 0.455 | neutral | N | 0.459433285 | None | None | I |
A/E | 0.2981 | likely_benign | 0.2647 | benign | -0.747 | Destabilizing | 0.547 | D | 0.389 | neutral | None | None | None | None | I |
A/F | 0.4466 | ambiguous | 0.409 | ambiguous | -0.915 | Destabilizing | 0.945 | D | 0.578 | neutral | None | None | None | None | I |
A/G | 0.1755 | likely_benign | 0.1713 | benign | -0.224 | Destabilizing | 0.273 | N | 0.392 | neutral | N | 0.480419059 | None | None | I |
A/H | 0.4434 | ambiguous | 0.4097 | ambiguous | -0.246 | Destabilizing | 0.985 | D | 0.561 | neutral | None | None | None | None | I |
A/I | 0.2167 | likely_benign | 0.2011 | benign | -0.347 | Destabilizing | 0.894 | D | 0.418 | neutral | None | None | None | None | I |
A/K | 0.4297 | ambiguous | 0.3699 | ambiguous | -0.549 | Destabilizing | 0.547 | D | 0.385 | neutral | None | None | None | None | I |
A/L | 0.1841 | likely_benign | 0.1665 | benign | -0.347 | Destabilizing | 0.707 | D | 0.412 | neutral | None | None | None | None | I |
A/M | 0.2264 | likely_benign | 0.212 | benign | -0.363 | Destabilizing | 0.995 | D | 0.415 | neutral | None | None | None | None | I |
A/N | 0.2427 | likely_benign | 0.2322 | benign | -0.213 | Destabilizing | 0.809 | D | 0.462 | neutral | None | None | None | None | I |
A/P | 0.2692 | likely_benign | 0.2353 | benign | -0.268 | Destabilizing | 0.928 | D | 0.42 | neutral | N | 0.48479309 | None | None | I |
A/Q | 0.3168 | likely_benign | 0.2861 | benign | -0.529 | Destabilizing | 0.894 | D | 0.412 | neutral | None | None | None | None | I |
A/R | 0.4175 | ambiguous | 0.3543 | ambiguous | -0.047 | Destabilizing | 0.894 | D | 0.416 | neutral | None | None | None | None | I |
A/S | 0.0985 | likely_benign | 0.1 | benign | -0.378 | Destabilizing | 0.002 | N | 0.251 | neutral | N | 0.408255103 | None | None | I |
A/T | 0.091 | likely_benign | 0.092 | benign | -0.472 | Destabilizing | 0.477 | N | 0.356 | neutral | N | 0.485579736 | None | None | I |
A/V | 0.1203 | likely_benign | 0.1146 | benign | -0.268 | Destabilizing | 0.645 | D | 0.358 | neutral | N | 0.477731044 | None | None | I |
A/W | 0.7897 | likely_pathogenic | 0.7316 | pathogenic | -1.032 | Destabilizing | 0.995 | D | 0.688 | prob.neutral | None | None | None | None | I |
A/Y | 0.5513 | ambiguous | 0.5012 | ambiguous | -0.688 | Destabilizing | 0.981 | D | 0.569 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.