Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21478 | 64657;64658;64659 | chr2:178585312;178585311;178585310 | chr2:179450039;179450038;179450037 |
N2AB | 19837 | 59734;59735;59736 | chr2:178585312;178585311;178585310 | chr2:179450039;179450038;179450037 |
N2A | 18910 | 56953;56954;56955 | chr2:178585312;178585311;178585310 | chr2:179450039;179450038;179450037 |
N2B | 12413 | 37462;37463;37464 | chr2:178585312;178585311;178585310 | chr2:179450039;179450038;179450037 |
Novex-1 | 12538 | 37837;37838;37839 | chr2:178585312;178585311;178585310 | chr2:179450039;179450038;179450037 |
Novex-2 | 12605 | 38038;38039;38040 | chr2:178585312;178585311;178585310 | chr2:179450039;179450038;179450037 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.988 | D | 0.529 | 0.417 | 0.410868550352 | gnomAD-4.0.0 | 1.59992E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88509E-05 | 0 | 0 | 0 | 0 |
I/V | None | None | 0.061 | N | 0.137 | 0.154 | 0.404453528171 | gnomAD-4.0.0 | 6.85842E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.20627E-06 | 1.16869E-05 | 1.66063E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4758 | ambiguous | 0.3082 | benign | -2.156 | Highly Destabilizing | 0.079 | N | 0.272 | neutral | None | None | None | None | N |
I/C | 0.7386 | likely_pathogenic | 0.6339 | pathogenic | -1.28 | Destabilizing | 0.999 | D | 0.557 | neutral | None | None | None | None | N |
I/D | 0.9557 | likely_pathogenic | 0.8974 | pathogenic | -2.014 | Highly Destabilizing | 0.884 | D | 0.609 | neutral | None | None | None | None | N |
I/E | 0.879 | likely_pathogenic | 0.7718 | pathogenic | -1.889 | Destabilizing | 0.17 | N | 0.373 | neutral | None | None | None | None | N |
I/F | 0.4924 | ambiguous | 0.3729 | ambiguous | -1.311 | Destabilizing | 0.988 | D | 0.561 | neutral | N | 0.514975216 | None | None | N |
I/G | 0.8585 | likely_pathogenic | 0.725 | pathogenic | -2.614 | Highly Destabilizing | 0.884 | D | 0.581 | neutral | None | None | None | None | N |
I/H | 0.8977 | likely_pathogenic | 0.8044 | pathogenic | -1.969 | Destabilizing | 0.999 | D | 0.59 | neutral | None | None | None | None | N |
I/K | 0.8422 | likely_pathogenic | 0.7122 | pathogenic | -1.638 | Destabilizing | 0.939 | D | 0.606 | neutral | None | None | None | None | N |
I/L | 0.2196 | likely_benign | 0.1629 | benign | -0.892 | Destabilizing | 0.509 | D | 0.316 | neutral | N | 0.470144216 | None | None | N |
I/M | 0.1742 | likely_benign | 0.1287 | benign | -0.669 | Destabilizing | 0.988 | D | 0.529 | neutral | D | 0.533830335 | None | None | N |
I/N | 0.7574 | likely_pathogenic | 0.5712 | pathogenic | -1.667 | Destabilizing | 0.988 | D | 0.624 | neutral | D | 0.53435041 | None | None | N |
I/P | 0.9784 | likely_pathogenic | 0.9647 | pathogenic | -1.288 | Destabilizing | 0.991 | D | 0.633 | neutral | None | None | None | None | N |
I/Q | 0.8095 | likely_pathogenic | 0.6684 | pathogenic | -1.68 | Destabilizing | 0.982 | D | 0.631 | neutral | None | None | None | None | N |
I/R | 0.7792 | likely_pathogenic | 0.6308 | pathogenic | -1.184 | Destabilizing | 0.982 | D | 0.631 | neutral | None | None | None | None | N |
I/S | 0.6301 | likely_pathogenic | 0.4377 | ambiguous | -2.338 | Highly Destabilizing | 0.852 | D | 0.515 | neutral | N | 0.514975216 | None | None | N |
I/T | 0.502 | ambiguous | 0.3209 | benign | -2.086 | Highly Destabilizing | 0.92 | D | 0.493 | neutral | N | 0.487076538 | None | None | N |
I/V | 0.0723 | likely_benign | 0.0597 | benign | -1.288 | Destabilizing | 0.061 | N | 0.137 | neutral | N | 0.372380022 | None | None | N |
I/W | 0.9571 | likely_pathogenic | 0.9374 | pathogenic | -1.604 | Destabilizing | 0.999 | D | 0.582 | neutral | None | None | None | None | N |
I/Y | 0.8532 | likely_pathogenic | 0.7714 | pathogenic | -1.33 | Destabilizing | 0.997 | D | 0.611 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.