Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21497 | 64714;64715;64716 | chr2:178585255;178585254;178585253 | chr2:179449982;179449981;179449980 |
N2AB | 19856 | 59791;59792;59793 | chr2:178585255;178585254;178585253 | chr2:179449982;179449981;179449980 |
N2A | 18929 | 57010;57011;57012 | chr2:178585255;178585254;178585253 | chr2:179449982;179449981;179449980 |
N2B | 12432 | 37519;37520;37521 | chr2:178585255;178585254;178585253 | chr2:179449982;179449981;179449980 |
Novex-1 | 12557 | 37894;37895;37896 | chr2:178585255;178585254;178585253 | chr2:179449982;179449981;179449980 |
Novex-2 | 12624 | 38095;38096;38097 | chr2:178585255;178585254;178585253 | chr2:179449982;179449981;179449980 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1236376736 | 0.192 | None | N | 0.118 | 0.143 | 0.0954503805726 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
T/I | rs1236376736 | 0.192 | None | N | 0.118 | 0.143 | 0.0954503805726 | gnomAD-4.0.0 | 1.36883E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79943E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0618 | likely_benign | 0.0637 | benign | -0.315 | Destabilizing | 0.003 | N | 0.239 | neutral | N | 0.484785595 | None | None | I |
T/C | 0.2577 | likely_benign | 0.2707 | benign | -0.098 | Destabilizing | 0.245 | N | 0.455 | neutral | None | None | None | None | I |
T/D | 0.2523 | likely_benign | 0.2406 | benign | -0.118 | Destabilizing | 0.044 | N | 0.441 | neutral | None | None | None | None | I |
T/E | 0.1963 | likely_benign | 0.1898 | benign | -0.185 | Destabilizing | 0.009 | N | 0.373 | neutral | None | None | None | None | I |
T/F | 0.1101 | likely_benign | 0.1074 | benign | -0.665 | Destabilizing | None | N | 0.195 | neutral | None | None | None | None | I |
T/G | 0.1618 | likely_benign | 0.1641 | benign | -0.478 | Destabilizing | 0.037 | N | 0.393 | neutral | None | None | None | None | I |
T/H | 0.1496 | likely_benign | 0.1462 | benign | -0.765 | Destabilizing | 0.245 | N | 0.499 | neutral | None | None | None | None | I |
T/I | 0.0559 | likely_benign | 0.0553 | benign | 0.004 | Stabilizing | None | N | 0.118 | neutral | N | 0.521303755 | None | None | I |
T/K | 0.1378 | likely_benign | 0.1285 | benign | -0.483 | Destabilizing | 0.009 | N | 0.378 | neutral | None | None | None | None | I |
T/L | 0.0565 | likely_benign | 0.0547 | benign | 0.004 | Stabilizing | None | N | 0.119 | neutral | None | None | None | None | I |
T/M | 0.0752 | likely_benign | 0.0756 | benign | 0.188 | Stabilizing | 0.001 | N | 0.261 | neutral | None | None | None | None | I |
T/N | 0.0861 | likely_benign | 0.0866 | benign | -0.147 | Destabilizing | 0.065 | N | 0.337 | neutral | N | 0.495194589 | None | None | I |
T/P | 0.3032 | likely_benign | 0.279 | benign | -0.073 | Destabilizing | 0.065 | N | 0.495 | neutral | N | 0.501065241 | None | None | I |
T/Q | 0.1454 | likely_benign | 0.1446 | benign | -0.391 | Destabilizing | 0.002 | N | 0.228 | neutral | None | None | None | None | I |
T/R | 0.1305 | likely_benign | 0.1198 | benign | -0.165 | Destabilizing | 0.044 | N | 0.449 | neutral | None | None | None | None | I |
T/S | 0.0732 | likely_benign | 0.0753 | benign | -0.321 | Destabilizing | 0.014 | N | 0.304 | neutral | N | 0.482358578 | None | None | I |
T/V | 0.0532 | likely_benign | 0.0532 | benign | -0.073 | Destabilizing | None | N | 0.071 | neutral | None | None | None | None | I |
T/W | 0.475 | ambiguous | 0.4519 | ambiguous | -0.685 | Destabilizing | 0.788 | D | 0.488 | neutral | None | None | None | None | I |
T/Y | 0.1763 | likely_benign | 0.1775 | benign | -0.428 | Destabilizing | 0.022 | N | 0.492 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.