Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21498 | 64717;64718;64719 | chr2:178585252;178585251;178585250 | chr2:179449979;179449978;179449977 |
N2AB | 19857 | 59794;59795;59796 | chr2:178585252;178585251;178585250 | chr2:179449979;179449978;179449977 |
N2A | 18930 | 57013;57014;57015 | chr2:178585252;178585251;178585250 | chr2:179449979;179449978;179449977 |
N2B | 12433 | 37522;37523;37524 | chr2:178585252;178585251;178585250 | chr2:179449979;179449978;179449977 |
Novex-1 | 12558 | 37897;37898;37899 | chr2:178585252;178585251;178585250 | chr2:179449979;179449978;179449977 |
Novex-2 | 12625 | 38098;38099;38100 | chr2:178585252;178585251;178585250 | chr2:179449979;179449978;179449977 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | rs752724337 | -1.732 | 0.989 | N | 0.847 | 0.357 | 0.697263286892 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 1.65893E-04 |
C/Y | rs752724337 | -1.732 | 0.989 | N | 0.847 | 0.357 | 0.697263286892 | gnomAD-4.0.0 | 1.59235E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.49723E-04 | None | 0 | 2.41663E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.3843 | ambiguous | 0.3717 | ambiguous | -2.114 | Highly Destabilizing | 0.525 | D | 0.59 | neutral | None | None | None | None | N |
C/D | 0.9479 | likely_pathogenic | 0.9276 | pathogenic | -0.532 | Destabilizing | 0.949 | D | 0.826 | deleterious | None | None | None | None | N |
C/E | 0.9434 | likely_pathogenic | 0.924 | pathogenic | -0.435 | Destabilizing | 0.949 | D | 0.821 | deleterious | None | None | None | None | N |
C/F | 0.3816 | ambiguous | 0.373 | ambiguous | -1.338 | Destabilizing | 0.989 | D | 0.848 | deleterious | N | 0.46689048 | None | None | N |
C/G | 0.3381 | likely_benign | 0.3122 | benign | -2.421 | Highly Destabilizing | 0.669 | D | 0.808 | deleterious | D | 0.532576755 | None | None | N |
C/H | 0.8273 | likely_pathogenic | 0.7921 | pathogenic | -2.155 | Highly Destabilizing | 0.998 | D | 0.858 | deleterious | None | None | None | None | N |
C/I | 0.4019 | ambiguous | 0.4002 | ambiguous | -1.31 | Destabilizing | 0.949 | D | 0.777 | deleterious | None | None | None | None | N |
C/K | 0.9576 | likely_pathogenic | 0.9431 | pathogenic | -1.355 | Destabilizing | 0.949 | D | 0.827 | deleterious | None | None | None | None | N |
C/L | 0.4285 | ambiguous | 0.417 | ambiguous | -1.31 | Destabilizing | 0.842 | D | 0.693 | prob.neutral | None | None | None | None | N |
C/M | 0.6044 | likely_pathogenic | 0.5988 | pathogenic | -0.114 | Destabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | N |
C/N | 0.7839 | likely_pathogenic | 0.7433 | pathogenic | -1.23 | Destabilizing | 0.949 | D | 0.823 | deleterious | None | None | None | None | N |
C/P | 0.9148 | likely_pathogenic | 0.9094 | pathogenic | -1.555 | Destabilizing | 0.974 | D | 0.85 | deleterious | None | None | None | None | N |
C/Q | 0.8518 | likely_pathogenic | 0.8214 | pathogenic | -1.164 | Destabilizing | 0.974 | D | 0.855 | deleterious | None | None | None | None | N |
C/R | 0.8154 | likely_pathogenic | 0.7784 | pathogenic | -1.047 | Destabilizing | 0.934 | D | 0.851 | deleterious | D | 0.532576755 | None | None | N |
C/S | 0.3417 | ambiguous | 0.3214 | benign | -1.851 | Destabilizing | 0.051 | N | 0.484 | neutral | N | 0.484188162 | None | None | N |
C/T | 0.3705 | ambiguous | 0.3556 | ambiguous | -1.578 | Destabilizing | 0.067 | N | 0.477 | neutral | None | None | None | None | N |
C/V | 0.2891 | likely_benign | 0.2944 | benign | -1.555 | Destabilizing | 0.842 | D | 0.721 | prob.delet. | None | None | None | None | N |
C/W | 0.7453 | likely_pathogenic | 0.7264 | pathogenic | -1.236 | Destabilizing | 0.997 | D | 0.849 | deleterious | N | 0.502947281 | None | None | N |
C/Y | 0.543 | ambiguous | 0.4994 | ambiguous | -1.325 | Destabilizing | 0.989 | D | 0.847 | deleterious | N | 0.457790994 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.