Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21514 | 64765;64766;64767 | chr2:178585204;178585203;178585202 | chr2:179449931;179449930;179449929 |
N2AB | 19873 | 59842;59843;59844 | chr2:178585204;178585203;178585202 | chr2:179449931;179449930;179449929 |
N2A | 18946 | 57061;57062;57063 | chr2:178585204;178585203;178585202 | chr2:179449931;179449930;179449929 |
N2B | 12449 | 37570;37571;37572 | chr2:178585204;178585203;178585202 | chr2:179449931;179449930;179449929 |
Novex-1 | 12574 | 37945;37946;37947 | chr2:178585204;178585203;178585202 | chr2:179449931;179449930;179449929 |
Novex-2 | 12641 | 38146;38147;38148 | chr2:178585204;178585203;178585202 | chr2:179449931;179449930;179449929 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1060500520 | None | 0.026 | N | 0.231 | 0.142 | 0.394837016283 | gnomAD-4.0.0 | 2.05314E-06 | None | None | None | None | N | None | 2.98972E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79937E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5462 | ambiguous | 0.5461 | ambiguous | -1.229 | Destabilizing | 0.999 | D | 0.486 | neutral | None | None | None | None | N |
A/D | 0.6545 | likely_pathogenic | 0.5697 | pathogenic | -1.772 | Destabilizing | 0.976 | D | 0.639 | neutral | None | None | None | None | N |
A/E | 0.538 | ambiguous | 0.471 | ambiguous | -1.723 | Destabilizing | 0.968 | D | 0.497 | neutral | N | 0.443533618 | None | None | N |
A/F | 0.4537 | ambiguous | 0.4518 | ambiguous | -1.036 | Destabilizing | 0.976 | D | 0.674 | neutral | None | None | None | None | N |
A/G | 0.3057 | likely_benign | 0.2681 | benign | -1.453 | Destabilizing | 0.896 | D | 0.419 | neutral | N | 0.487383183 | None | None | N |
A/H | 0.6048 | likely_pathogenic | 0.5794 | pathogenic | -1.766 | Destabilizing | 0.999 | D | 0.656 | neutral | None | None | None | None | N |
A/I | 0.3239 | likely_benign | 0.3055 | benign | -0.251 | Destabilizing | 0.851 | D | 0.472 | neutral | None | None | None | None | N |
A/K | 0.7723 | likely_pathogenic | 0.7337 | pathogenic | -1.4 | Destabilizing | 0.976 | D | 0.502 | neutral | None | None | None | None | N |
A/L | 0.2219 | likely_benign | 0.2246 | benign | -0.251 | Destabilizing | 0.851 | D | 0.446 | neutral | None | None | None | None | N |
A/M | 0.2607 | likely_benign | 0.2805 | benign | -0.279 | Destabilizing | 0.997 | D | 0.593 | neutral | None | None | None | None | N |
A/N | 0.444 | ambiguous | 0.4202 | ambiguous | -1.306 | Destabilizing | 0.976 | D | 0.649 | neutral | None | None | None | None | N |
A/P | 0.9124 | likely_pathogenic | 0.8563 | pathogenic | -0.491 | Destabilizing | 0.984 | D | 0.589 | neutral | N | 0.498600254 | None | None | N |
A/Q | 0.5033 | ambiguous | 0.4858 | ambiguous | -1.348 | Destabilizing | 0.988 | D | 0.593 | neutral | None | None | None | None | N |
A/R | 0.6961 | likely_pathogenic | 0.6603 | pathogenic | -1.206 | Destabilizing | 0.988 | D | 0.594 | neutral | None | None | None | None | N |
A/S | 0.1309 | likely_benign | 0.123 | benign | -1.711 | Destabilizing | 0.251 | N | 0.239 | neutral | N | 0.417867169 | None | None | N |
A/T | 0.1239 | likely_benign | 0.1142 | benign | -1.553 | Destabilizing | 0.811 | D | 0.402 | neutral | N | 0.426084008 | None | None | N |
A/V | 0.1694 | likely_benign | 0.1594 | benign | -0.491 | Destabilizing | 0.026 | N | 0.231 | neutral | N | 0.454366687 | None | None | N |
A/W | 0.8389 | likely_pathogenic | 0.8365 | pathogenic | -1.539 | Destabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | N |
A/Y | 0.5792 | likely_pathogenic | 0.5606 | ambiguous | -1.084 | Destabilizing | 0.988 | D | 0.671 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.