Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2152 | 6679;6680;6681 | chr2:178775410;178775409;178775408 | chr2:179640137;179640136;179640135 |
N2AB | 2152 | 6679;6680;6681 | chr2:178775410;178775409;178775408 | chr2:179640137;179640136;179640135 |
N2A | 2152 | 6679;6680;6681 | chr2:178775410;178775409;178775408 | chr2:179640137;179640136;179640135 |
N2B | 2106 | 6541;6542;6543 | chr2:178775410;178775409;178775408 | chr2:179640137;179640136;179640135 |
Novex-1 | 2106 | 6541;6542;6543 | chr2:178775410;178775409;178775408 | chr2:179640137;179640136;179640135 |
Novex-2 | 2106 | 6541;6542;6543 | chr2:178775410;178775409;178775408 | chr2:179640137;179640136;179640135 |
Novex-3 | 2152 | 6679;6680;6681 | chr2:178775410;178775409;178775408 | chr2:179640137;179640136;179640135 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 1.0 | N | 0.817 | 0.458 | 0.357724736475 | gnomAD-4.0.0 | 1.59064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85649E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9409 | likely_pathogenic | 0.951 | pathogenic | -0.981 | Destabilizing | 0.999 | D | 0.728 | prob.delet. | None | None | None | None | I |
K/C | 0.9614 | likely_pathogenic | 0.9629 | pathogenic | -1.169 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | I |
K/D | 0.985 | likely_pathogenic | 0.9875 | pathogenic | -1.112 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | I |
K/E | 0.8112 | likely_pathogenic | 0.84 | pathogenic | -0.921 | Destabilizing | 0.999 | D | 0.669 | neutral | N | 0.5085053 | None | None | I |
K/F | 0.9924 | likely_pathogenic | 0.9934 | pathogenic | -0.434 | Destabilizing | 1.0 | D | 0.916 | deleterious | None | None | None | None | I |
K/G | 0.9755 | likely_pathogenic | 0.9782 | pathogenic | -1.421 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | I |
K/H | 0.7025 | likely_pathogenic | 0.7329 | pathogenic | -1.752 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | I |
K/I | 0.9045 | likely_pathogenic | 0.9202 | pathogenic | 0.211 | Stabilizing | 1.0 | D | 0.921 | deleterious | N | 0.503632552 | None | None | I |
K/L | 0.8956 | likely_pathogenic | 0.9021 | pathogenic | 0.211 | Stabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | I |
K/M | 0.794 | likely_pathogenic | 0.8173 | pathogenic | 0.035 | Stabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
K/N | 0.9403 | likely_pathogenic | 0.9505 | pathogenic | -1.298 | Destabilizing | 1.0 | D | 0.823 | deleterious | N | 0.508130827 | None | None | I |
K/P | 0.9986 | likely_pathogenic | 0.9986 | pathogenic | -0.159 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | I |
K/Q | 0.5259 | ambiguous | 0.5713 | pathogenic | -1.212 | Destabilizing | 1.0 | D | 0.817 | deleterious | N | 0.511665423 | None | None | I |
K/R | 0.1413 | likely_benign | 0.1498 | benign | -1.093 | Destabilizing | 0.999 | D | 0.638 | neutral | N | 0.474190997 | None | None | I |
K/S | 0.9473 | likely_pathogenic | 0.9574 | pathogenic | -1.882 | Destabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | I |
K/T | 0.7246 | likely_pathogenic | 0.7811 | pathogenic | -1.457 | Destabilizing | 1.0 | D | 0.849 | deleterious | N | 0.498012396 | None | None | I |
K/V | 0.8532 | likely_pathogenic | 0.8733 | pathogenic | -0.159 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | I |
K/W | 0.984 | likely_pathogenic | 0.9874 | pathogenic | -0.398 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | I |
K/Y | 0.975 | likely_pathogenic | 0.9788 | pathogenic | -0.062 | Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.