Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21523 | 64792;64793;64794 | chr2:178585177;178585176;178585175 | chr2:179449904;179449903;179449902 |
N2AB | 19882 | 59869;59870;59871 | chr2:178585177;178585176;178585175 | chr2:179449904;179449903;179449902 |
N2A | 18955 | 57088;57089;57090 | chr2:178585177;178585176;178585175 | chr2:179449904;179449903;179449902 |
N2B | 12458 | 37597;37598;37599 | chr2:178585177;178585176;178585175 | chr2:179449904;179449903;179449902 |
Novex-1 | 12583 | 37972;37973;37974 | chr2:178585177;178585176;178585175 | chr2:179449904;179449903;179449902 |
Novex-2 | 12650 | 38173;38174;38175 | chr2:178585177;178585176;178585175 | chr2:179449904;179449903;179449902 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs761550336 | -1.269 | None | N | 0.117 | 0.16 | 0.246215685461 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
I/V | rs761550336 | -1.269 | None | N | 0.117 | 0.16 | 0.246215685461 | gnomAD-4.0.0 | 1.11455E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86044E-06 | 7.16764E-05 | 3.02663E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3546 | ambiguous | 0.4033 | ambiguous | -2.687 | Highly Destabilizing | 0.007 | N | 0.373 | neutral | None | None | None | None | I |
I/C | 0.6369 | likely_pathogenic | 0.6705 | pathogenic | -1.897 | Destabilizing | 0.356 | N | 0.522 | neutral | None | None | None | None | I |
I/D | 0.8276 | likely_pathogenic | 0.8459 | pathogenic | -3.04 | Highly Destabilizing | 0.136 | N | 0.593 | neutral | None | None | None | None | I |
I/E | 0.7287 | likely_pathogenic | 0.7421 | pathogenic | -2.864 | Highly Destabilizing | 0.136 | N | 0.542 | neutral | None | None | None | None | I |
I/F | 0.21 | likely_benign | 0.221 | benign | -1.645 | Destabilizing | 0.055 | N | 0.439 | neutral | N | 0.464351607 | None | None | I |
I/G | 0.6961 | likely_pathogenic | 0.7416 | pathogenic | -3.18 | Highly Destabilizing | 0.136 | N | 0.536 | neutral | None | None | None | None | I |
I/H | 0.5952 | likely_pathogenic | 0.6307 | pathogenic | -2.559 | Highly Destabilizing | 0.864 | D | 0.566 | neutral | None | None | None | None | I |
I/K | 0.6238 | likely_pathogenic | 0.6383 | pathogenic | -2.082 | Highly Destabilizing | 0.136 | N | 0.536 | neutral | None | None | None | None | I |
I/L | 0.1359 | likely_benign | 0.1317 | benign | -1.273 | Destabilizing | None | N | 0.115 | neutral | N | 0.421888909 | None | None | I |
I/M | 0.1179 | likely_benign | 0.1239 | benign | -1.147 | Destabilizing | 0.171 | N | 0.467 | neutral | N | 0.473856525 | None | None | I |
I/N | 0.3512 | ambiguous | 0.3683 | ambiguous | -2.297 | Highly Destabilizing | 0.295 | N | 0.612 | neutral | N | 0.447478 | None | None | I |
I/P | 0.9718 | likely_pathogenic | 0.9717 | pathogenic | -1.725 | Destabilizing | 0.628 | D | 0.613 | neutral | None | None | None | None | I |
I/Q | 0.5722 | likely_pathogenic | 0.6107 | pathogenic | -2.252 | Highly Destabilizing | 0.628 | D | 0.586 | neutral | None | None | None | None | I |
I/R | 0.5331 | ambiguous | 0.5473 | ambiguous | -1.637 | Destabilizing | 0.356 | N | 0.605 | neutral | None | None | None | None | I |
I/S | 0.3059 | likely_benign | 0.3364 | benign | -2.951 | Highly Destabilizing | 0.012 | N | 0.483 | neutral | N | 0.379058065 | None | None | I |
I/T | 0.1941 | likely_benign | 0.2344 | benign | -2.649 | Highly Destabilizing | None | N | 0.236 | neutral | N | 0.374110818 | None | None | I |
I/V | 0.0605 | likely_benign | 0.0679 | benign | -1.725 | Destabilizing | None | N | 0.117 | neutral | N | 0.376636622 | None | None | I |
I/W | 0.8531 | likely_pathogenic | 0.8755 | pathogenic | -2.022 | Highly Destabilizing | 0.864 | D | 0.595 | neutral | None | None | None | None | I |
I/Y | 0.5343 | ambiguous | 0.5257 | ambiguous | -1.79 | Destabilizing | 0.356 | N | 0.558 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.