Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21534 | 64825;64826;64827 | chr2:178585144;178585143;178585142 | chr2:179449871;179449870;179449869 |
N2AB | 19893 | 59902;59903;59904 | chr2:178585144;178585143;178585142 | chr2:179449871;179449870;179449869 |
N2A | 18966 | 57121;57122;57123 | chr2:178585144;178585143;178585142 | chr2:179449871;179449870;179449869 |
N2B | 12469 | 37630;37631;37632 | chr2:178585144;178585143;178585142 | chr2:179449871;179449870;179449869 |
Novex-1 | 12594 | 38005;38006;38007 | chr2:178585144;178585143;178585142 | chr2:179449871;179449870;179449869 |
Novex-2 | 12661 | 38206;38207;38208 | chr2:178585144;178585143;178585142 | chr2:179449871;179449870;179449869 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | rs768431801 | -1.263 | 0.939 | N | 0.437 | 0.272 | 0.341226946553 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1085 | likely_benign | 0.1008 | benign | -0.713 | Destabilizing | 0.807 | D | 0.375 | neutral | None | None | None | None | N |
S/C | 0.1735 | likely_benign | 0.149 | benign | -0.427 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | D | 0.527958588 | None | None | N |
S/D | 0.8868 | likely_pathogenic | 0.8269 | pathogenic | 0.258 | Stabilizing | 0.953 | D | 0.483 | neutral | None | None | None | None | N |
S/E | 0.8959 | likely_pathogenic | 0.8504 | pathogenic | 0.234 | Stabilizing | 0.953 | D | 0.481 | neutral | None | None | None | None | N |
S/F | 0.6911 | likely_pathogenic | 0.6255 | pathogenic | -1.011 | Destabilizing | 0.993 | D | 0.821 | deleterious | None | None | None | None | N |
S/G | 0.1235 | likely_benign | 0.1054 | benign | -0.928 | Destabilizing | 0.939 | D | 0.437 | neutral | N | 0.487190948 | None | None | N |
S/H | 0.8028 | likely_pathogenic | 0.7296 | pathogenic | -1.385 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
S/I | 0.5581 | ambiguous | 0.5179 | ambiguous | -0.253 | Destabilizing | 0.982 | D | 0.798 | deleterious | N | 0.506878592 | None | None | N |
S/K | 0.9559 | likely_pathogenic | 0.922 | pathogenic | -0.508 | Destabilizing | 0.953 | D | 0.479 | neutral | None | None | None | None | N |
S/L | 0.3317 | likely_benign | 0.2681 | benign | -0.253 | Destabilizing | 0.91 | D | 0.618 | neutral | None | None | None | None | N |
S/M | 0.4338 | ambiguous | 0.3783 | ambiguous | -0.009 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
S/N | 0.4759 | ambiguous | 0.3965 | ambiguous | -0.401 | Destabilizing | 0.939 | D | 0.485 | neutral | N | 0.496977091 | None | None | N |
S/P | 0.9682 | likely_pathogenic | 0.9599 | pathogenic | -0.374 | Destabilizing | 0.993 | D | 0.753 | deleterious | None | None | None | None | N |
S/Q | 0.8367 | likely_pathogenic | 0.7784 | pathogenic | -0.554 | Destabilizing | 0.993 | D | 0.648 | neutral | None | None | None | None | N |
S/R | 0.9084 | likely_pathogenic | 0.8594 | pathogenic | -0.43 | Destabilizing | 0.991 | D | 0.765 | deleterious | N | 0.49335624 | None | None | N |
S/T | 0.1263 | likely_benign | 0.1101 | benign | -0.501 | Destabilizing | 0.17 | N | 0.361 | neutral | N | 0.509337322 | None | None | N |
S/V | 0.4965 | ambiguous | 0.4534 | ambiguous | -0.374 | Destabilizing | 0.973 | D | 0.703 | prob.neutral | None | None | None | None | N |
S/W | 0.8577 | likely_pathogenic | 0.8062 | pathogenic | -0.957 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
S/Y | 0.6655 | likely_pathogenic | 0.5814 | pathogenic | -0.693 | Destabilizing | 0.998 | D | 0.812 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.