Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21538 | 64837;64838;64839 | chr2:178585132;178585131;178585130 | chr2:179449859;179449858;179449857 |
N2AB | 19897 | 59914;59915;59916 | chr2:178585132;178585131;178585130 | chr2:179449859;179449858;179449857 |
N2A | 18970 | 57133;57134;57135 | chr2:178585132;178585131;178585130 | chr2:179449859;179449858;179449857 |
N2B | 12473 | 37642;37643;37644 | chr2:178585132;178585131;178585130 | chr2:179449859;179449858;179449857 |
Novex-1 | 12598 | 38017;38018;38019 | chr2:178585132;178585131;178585130 | chr2:179449859;179449858;179449857 |
Novex-2 | 12665 | 38218;38219;38220 | chr2:178585132;178585131;178585130 | chr2:179449859;179449858;179449857 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | rs1297730026 | None | 0.124 | N | 0.614 | 0.136 | 0.239901079897 | gnomAD-4.0.0 | 4.7781E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 8.3227E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0821 | likely_benign | 0.0851 | benign | -0.814 | Destabilizing | 0.072 | N | 0.609 | neutral | None | None | None | None | N |
S/C | 0.0717 | likely_benign | 0.0734 | benign | -0.561 | Destabilizing | 0.958 | D | 0.689 | prob.neutral | N | 0.477279089 | None | None | N |
S/D | 0.5228 | ambiguous | 0.4767 | ambiguous | -1.48 | Destabilizing | 0.157 | N | 0.623 | neutral | None | None | None | None | N |
S/E | 0.4614 | ambiguous | 0.4338 | ambiguous | -1.274 | Destabilizing | 0.157 | N | 0.627 | neutral | None | None | None | None | N |
S/F | 0.1108 | likely_benign | 0.1129 | benign | -0.629 | Destabilizing | 0.726 | D | 0.757 | deleterious | None | None | None | None | N |
S/G | 0.127 | likely_benign | 0.122 | benign | -1.211 | Destabilizing | 0.124 | N | 0.614 | neutral | N | 0.456452583 | None | None | N |
S/H | 0.2519 | likely_benign | 0.2328 | benign | -1.561 | Destabilizing | 0.832 | D | 0.704 | prob.neutral | None | None | None | None | N |
S/I | 0.0939 | likely_benign | 0.0988 | benign | 0.202 | Stabilizing | 0.497 | N | 0.732 | prob.delet. | N | 0.46438524 | None | None | N |
S/K | 0.6756 | likely_pathogenic | 0.6422 | pathogenic | -0.135 | Destabilizing | 0.157 | N | 0.629 | neutral | None | None | None | None | N |
S/L | 0.0691 | likely_benign | 0.0706 | benign | 0.202 | Stabilizing | 0.157 | N | 0.689 | prob.neutral | None | None | None | None | N |
S/M | 0.1264 | likely_benign | 0.1358 | benign | 0.02 | Stabilizing | 0.968 | D | 0.697 | prob.neutral | None | None | None | None | N |
S/N | 0.1607 | likely_benign | 0.1536 | benign | -0.846 | Destabilizing | 0.001 | N | 0.46 | neutral | N | 0.470442234 | None | None | N |
S/P | 0.8227 | likely_pathogenic | 0.8094 | pathogenic | -0.102 | Destabilizing | 0.726 | D | 0.695 | prob.neutral | None | None | None | None | N |
S/Q | 0.4094 | ambiguous | 0.3895 | ambiguous | -0.577 | Destabilizing | 0.567 | D | 0.671 | neutral | None | None | None | None | N |
S/R | 0.5587 | ambiguous | 0.5294 | ambiguous | -0.576 | Destabilizing | 0.497 | N | 0.687 | prob.neutral | N | 0.47437016 | None | None | N |
S/T | 0.0613 | likely_benign | 0.0682 | benign | -0.489 | Destabilizing | 0.004 | N | 0.438 | neutral | N | 0.423573194 | None | None | N |
S/V | 0.108 | likely_benign | 0.113 | benign | -0.102 | Destabilizing | 0.396 | N | 0.712 | prob.delet. | None | None | None | None | N |
S/W | 0.2285 | likely_benign | 0.224 | benign | -0.927 | Destabilizing | 0.968 | D | 0.764 | deleterious | None | None | None | None | N |
S/Y | 0.1077 | likely_benign | 0.1079 | benign | -0.449 | Destabilizing | 0.89 | D | 0.753 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.