Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21540 | 64843;64844;64845 | chr2:178585126;178585125;178585124 | chr2:179449853;179449852;179449851 |
N2AB | 19899 | 59920;59921;59922 | chr2:178585126;178585125;178585124 | chr2:179449853;179449852;179449851 |
N2A | 18972 | 57139;57140;57141 | chr2:178585126;178585125;178585124 | chr2:179449853;179449852;179449851 |
N2B | 12475 | 37648;37649;37650 | chr2:178585126;178585125;178585124 | chr2:179449853;179449852;179449851 |
Novex-1 | 12600 | 38023;38024;38025 | chr2:178585126;178585125;178585124 | chr2:179449853;179449852;179449851 |
Novex-2 | 12667 | 38224;38225;38226 | chr2:178585126;178585125;178585124 | chr2:179449853;179449852;179449851 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1284135964 | 0.51 | 0.012 | N | 0.446 | 0.179 | 0.29132392195 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs1284135964 | 0.51 | 0.012 | N | 0.446 | 0.179 | 0.29132392195 | gnomAD-4.0.0 | 1.36907E-06 | None | None | None | None | N | None | 0 | 2.23884E-05 | None | 0 | 0 | None | 0 | 0 | 8.99816E-07 | 0 | 0 |
T/R | None | None | 0.966 | N | 0.683 | 0.333 | 0.441740949975 | gnomAD-4.0.0 | 6.84537E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.1606E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0954 | likely_benign | 0.0922 | benign | -0.881 | Destabilizing | 0.454 | N | 0.521 | neutral | N | 0.521765115 | None | None | N |
T/C | 0.286 | likely_benign | 0.2673 | benign | -0.806 | Destabilizing | 0.998 | D | 0.666 | neutral | None | None | None | None | N |
T/D | 0.478 | ambiguous | 0.4539 | ambiguous | -1.467 | Destabilizing | 0.842 | D | 0.618 | neutral | None | None | None | None | N |
T/E | 0.2801 | likely_benign | 0.2737 | benign | -1.389 | Destabilizing | 0.842 | D | 0.611 | neutral | None | None | None | None | N |
T/F | 0.1943 | likely_benign | 0.1755 | benign | -0.848 | Destabilizing | 0.949 | D | 0.733 | prob.delet. | None | None | None | None | N |
T/G | 0.3293 | likely_benign | 0.3075 | benign | -1.199 | Destabilizing | 0.842 | D | 0.663 | neutral | None | None | None | None | N |
T/H | 0.2038 | likely_benign | 0.1862 | benign | -1.507 | Destabilizing | 0.998 | D | 0.726 | prob.delet. | None | None | None | None | N |
T/I | 0.1078 | likely_benign | 0.0971 | benign | -0.098 | Destabilizing | 0.012 | N | 0.446 | neutral | N | 0.472280444 | None | None | N |
T/K | 0.2195 | likely_benign | 0.2043 | benign | -0.823 | Destabilizing | 0.801 | D | 0.615 | neutral | N | 0.475240605 | None | None | N |
T/L | 0.0965 | likely_benign | 0.0887 | benign | -0.098 | Destabilizing | 0.525 | D | 0.602 | neutral | None | None | None | None | N |
T/M | 0.0782 | likely_benign | 0.0802 | benign | 0.183 | Stabilizing | 0.949 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/N | 0.1701 | likely_benign | 0.1569 | benign | -1.189 | Destabilizing | 0.842 | D | 0.606 | neutral | None | None | None | None | N |
T/P | 0.792 | likely_pathogenic | 0.7543 | pathogenic | -0.326 | Destabilizing | 0.966 | D | 0.672 | neutral | N | 0.502065972 | None | None | N |
T/Q | 0.1946 | likely_benign | 0.1928 | benign | -1.288 | Destabilizing | 0.974 | D | 0.692 | prob.neutral | None | None | None | None | N |
T/R | 0.186 | likely_benign | 0.1707 | benign | -0.685 | Destabilizing | 0.966 | D | 0.683 | prob.neutral | N | 0.449152868 | None | None | N |
T/S | 0.1173 | likely_benign | 0.1128 | benign | -1.324 | Destabilizing | 0.062 | N | 0.287 | neutral | N | 0.45496412 | None | None | N |
T/V | 0.0929 | likely_benign | 0.0866 | benign | -0.326 | Destabilizing | 0.525 | D | 0.591 | neutral | None | None | None | None | N |
T/W | 0.5071 | ambiguous | 0.4875 | ambiguous | -0.907 | Destabilizing | 0.998 | D | 0.751 | deleterious | None | None | None | None | N |
T/Y | 0.2394 | likely_benign | 0.2175 | benign | -0.579 | Destabilizing | 0.991 | D | 0.743 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.