Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21571 | 64936;64937;64938 | chr2:178584930;178584929;178584928 | chr2:179449657;179449656;179449655 |
N2AB | 19930 | 60013;60014;60015 | chr2:178584930;178584929;178584928 | chr2:179449657;179449656;179449655 |
N2A | 19003 | 57232;57233;57234 | chr2:178584930;178584929;178584928 | chr2:179449657;179449656;179449655 |
N2B | 12506 | 37741;37742;37743 | chr2:178584930;178584929;178584928 | chr2:179449657;179449656;179449655 |
Novex-1 | 12631 | 38116;38117;38118 | chr2:178584930;178584929;178584928 | chr2:179449657;179449656;179449655 |
Novex-2 | 12698 | 38317;38318;38319 | chr2:178584930;178584929;178584928 | chr2:179449657;179449656;179449655 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs750771623 | 0.596 | 0.22 | N | 0.505 | 0.198 | 0.198526703765 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
D/N | rs750771623 | 0.596 | 0.22 | N | 0.505 | 0.198 | 0.198526703765 | gnomAD-4.0.0 | 4.77737E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.5802E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1831 | likely_benign | 0.1983 | benign | -0.275 | Destabilizing | 0.124 | N | 0.488 | neutral | N | 0.466088866 | None | None | N |
D/C | 0.621 | likely_pathogenic | 0.6094 | pathogenic | 0.212 | Stabilizing | 0.968 | D | 0.647 | neutral | None | None | None | None | N |
D/E | 0.1026 | likely_benign | 0.1094 | benign | -0.213 | Destabilizing | None | N | 0.083 | neutral | N | 0.420605538 | None | None | N |
D/F | 0.686 | likely_pathogenic | 0.6986 | pathogenic | -0.365 | Destabilizing | 0.89 | D | 0.579 | neutral | None | None | None | None | N |
D/G | 0.2031 | likely_benign | 0.2161 | benign | -0.439 | Destabilizing | 0.001 | N | 0.161 | neutral | N | 0.476484119 | None | None | N |
D/H | 0.346 | ambiguous | 0.3726 | ambiguous | -0.236 | Destabilizing | 0.667 | D | 0.521 | neutral | N | 0.495628786 | None | None | N |
D/I | 0.4734 | ambiguous | 0.5051 | ambiguous | 0.1 | Stabilizing | 0.726 | D | 0.573 | neutral | None | None | None | None | N |
D/K | 0.4154 | ambiguous | 0.4501 | ambiguous | 0.48 | Stabilizing | 0.157 | N | 0.463 | neutral | None | None | None | None | N |
D/L | 0.4591 | ambiguous | 0.4802 | ambiguous | 0.1 | Stabilizing | 0.567 | D | 0.522 | neutral | None | None | None | None | N |
D/M | 0.61 | likely_pathogenic | 0.6248 | pathogenic | 0.332 | Stabilizing | 0.968 | D | 0.568 | neutral | None | None | None | None | N |
D/N | 0.1171 | likely_benign | 0.1233 | benign | 0.239 | Stabilizing | 0.22 | N | 0.505 | neutral | N | 0.474362665 | None | None | N |
D/P | 0.8759 | likely_pathogenic | 0.906 | pathogenic | -0.004 | Destabilizing | 0.726 | D | 0.482 | neutral | None | None | None | None | N |
D/Q | 0.3094 | likely_benign | 0.3348 | benign | 0.249 | Stabilizing | 0.396 | N | 0.454 | neutral | None | None | None | None | N |
D/R | 0.4809 | ambiguous | 0.5182 | ambiguous | 0.527 | Stabilizing | 0.396 | N | 0.521 | neutral | None | None | None | None | N |
D/S | 0.1417 | likely_benign | 0.1475 | benign | 0.139 | Stabilizing | 0.157 | N | 0.463 | neutral | None | None | None | None | N |
D/T | 0.2677 | likely_benign | 0.2882 | benign | 0.269 | Stabilizing | 0.272 | N | 0.473 | neutral | None | None | None | None | N |
D/V | 0.2878 | likely_benign | 0.3099 | benign | -0.004 | Destabilizing | 0.497 | N | 0.502 | neutral | N | 0.469673718 | None | None | N |
D/W | 0.9069 | likely_pathogenic | 0.9165 | pathogenic | -0.271 | Destabilizing | 0.968 | D | 0.673 | neutral | None | None | None | None | N |
D/Y | 0.351 | ambiguous | 0.357 | ambiguous | -0.134 | Destabilizing | 0.859 | D | 0.579 | neutral | N | 0.502376735 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.