Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21586 | 64981;64982;64983 | chr2:178584885;178584884;178584883 | chr2:179449612;179449611;179449610 |
N2AB | 19945 | 60058;60059;60060 | chr2:178584885;178584884;178584883 | chr2:179449612;179449611;179449610 |
N2A | 19018 | 57277;57278;57279 | chr2:178584885;178584884;178584883 | chr2:179449612;179449611;179449610 |
N2B | 12521 | 37786;37787;37788 | chr2:178584885;178584884;178584883 | chr2:179449612;179449611;179449610 |
Novex-1 | 12646 | 38161;38162;38163 | chr2:178584885;178584884;178584883 | chr2:179449612;179449611;179449610 |
Novex-2 | 12713 | 38362;38363;38364 | chr2:178584885;178584884;178584883 | chr2:179449612;179449611;179449610 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs2048580704 | None | 0.999 | N | 0.6 | 0.456 | 0.345859378078 | gnomAD-4.0.0 | 3.1844E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85987E-06 | 0 | 3.0259E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4411 | ambiguous | 0.463 | ambiguous | -0.336 | Destabilizing | 0.999 | D | 0.6 | neutral | N | 0.485056875 | None | None | I |
E/C | 0.9375 | likely_pathogenic | 0.9395 | pathogenic | 0.033 | Stabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | I |
E/D | 0.2502 | likely_benign | 0.238 | benign | -0.319 | Destabilizing | 0.999 | D | 0.413 | neutral | N | 0.35604984 | None | None | I |
E/F | 0.905 | likely_pathogenic | 0.9065 | pathogenic | -0.262 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | I |
E/G | 0.5173 | ambiguous | 0.5503 | ambiguous | -0.529 | Destabilizing | 1.0 | D | 0.595 | neutral | N | 0.516379859 | None | None | I |
E/H | 0.7343 | likely_pathogenic | 0.7737 | pathogenic | -0.117 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | I |
E/I | 0.7925 | likely_pathogenic | 0.742 | pathogenic | 0.135 | Stabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | I |
E/K | 0.5983 | likely_pathogenic | 0.6217 | pathogenic | 0.378 | Stabilizing | 0.999 | D | 0.574 | neutral | N | 0.478418904 | None | None | I |
E/L | 0.7551 | likely_pathogenic | 0.7483 | pathogenic | 0.135 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
E/M | 0.7626 | likely_pathogenic | 0.766 | pathogenic | 0.249 | Stabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | I |
E/N | 0.5167 | ambiguous | 0.531 | ambiguous | 0.079 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
E/P | 0.9769 | likely_pathogenic | 0.9798 | pathogenic | -0.002 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
E/Q | 0.279 | likely_benign | 0.3229 | benign | 0.117 | Stabilizing | 1.0 | D | 0.598 | neutral | N | 0.469164702 | None | None | I |
E/R | 0.6825 | likely_pathogenic | 0.7234 | pathogenic | 0.507 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
E/S | 0.4699 | ambiguous | 0.5055 | ambiguous | -0.069 | Destabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | I |
E/T | 0.5611 | ambiguous | 0.5524 | ambiguous | 0.091 | Stabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | I |
E/V | 0.5736 | likely_pathogenic | 0.535 | ambiguous | -0.002 | Destabilizing | 1.0 | D | 0.67 | neutral | N | 0.486403669 | None | None | I |
E/W | 0.9612 | likely_pathogenic | 0.967 | pathogenic | -0.132 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | I |
E/Y | 0.8199 | likely_pathogenic | 0.8452 | pathogenic | -0.023 | Destabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.