Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21597 | 65014;65015;65016 | chr2:178584852;178584851;178584850 | chr2:179449579;179449578;179449577 |
N2AB | 19956 | 60091;60092;60093 | chr2:178584852;178584851;178584850 | chr2:179449579;179449578;179449577 |
N2A | 19029 | 57310;57311;57312 | chr2:178584852;178584851;178584850 | chr2:179449579;179449578;179449577 |
N2B | 12532 | 37819;37820;37821 | chr2:178584852;178584851;178584850 | chr2:179449579;179449578;179449577 |
Novex-1 | 12657 | 38194;38195;38196 | chr2:178584852;178584851;178584850 | chr2:179449579;179449578;179449577 |
Novex-2 | 12724 | 38395;38396;38397 | chr2:178584852;178584851;178584850 | chr2:179449579;179449578;179449577 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1374577570 | -2.742 | 0.998 | D | 0.619 | 0.542 | 0.783386442946 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/A | rs1374577570 | -2.742 | 0.998 | D | 0.619 | 0.542 | 0.783386442946 | gnomAD-4.0.0 | 1.59207E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43299E-05 | 0 |
V/E | None | None | 1.0 | D | 0.882 | 0.715 | 0.892875781192 | gnomAD-4.0.0 | 1.59207E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85987E-06 | 0 | 0 |
V/L | rs150661999 | -0.501 | 0.981 | N | 0.575 | 0.294 | 0.637308043038 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
V/L | rs150661999 | -0.501 | 0.981 | N | 0.575 | 0.294 | 0.637308043038 | gnomAD-4.0.0 | 6.8436E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52169E-05 | None | 0 | 0 | 0 | 0 | 0 |
V/M | rs150661999 | -0.884 | 0.999 | D | 0.757 | 0.518 | None | gnomAD-2.1.1 | 3.40481E-03 | None | None | None | None | N | None | 2.06748E-04 | 7.6392E-04 | None | 1.06527E-03 | 1.02912E-04 | None | 2.16993E-02 | None | 4E-05 | 1.73225E-03 | 2.95027E-03 |
V/M | rs150661999 | -0.884 | 0.999 | D | 0.757 | 0.518 | None | gnomAD-3.1.2 | 1.76969E-03 | None | None | None | None | N | None | 2.41453E-04 | 1.83655E-03 | 0 | 8.64553E-04 | 1.9425E-04 | None | 0 | 0 | 1.63322E-03 | 2.33664E-02 | 1.43403E-03 |
V/M | rs150661999 | -0.884 | 0.999 | D | 0.757 | 0.518 | None | 1000 genomes | 5.99042E-03 | None | None | None | None | N | None | 0 | 1.4E-03 | None | None | 0 | 2E-03 | None | None | None | 2.76E-02 | None |
V/M | rs150661999 | -0.884 | 0.999 | D | 0.757 | 0.518 | None | gnomAD-4.0.0 | 2.18863E-03 | None | None | None | None | N | None | 3.20085E-04 | 9.83792E-04 | None | 8.44994E-04 | 1.78603E-04 | None | 6.2502E-05 | 4.12814E-03 | 1.0801E-03 | 2.11906E-02 | 2.91443E-03 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.865 | likely_pathogenic | 0.8812 | pathogenic | -2.44 | Highly Destabilizing | 0.998 | D | 0.619 | neutral | D | 0.550364803 | None | None | N |
V/C | 0.9754 | likely_pathogenic | 0.9722 | pathogenic | -1.995 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
V/D | 0.9992 | likely_pathogenic | 0.9994 | pathogenic | -3.483 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
V/E | 0.9957 | likely_pathogenic | 0.9966 | pathogenic | -3.153 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | D | 0.562646161 | None | None | N |
V/F | 0.8868 | likely_pathogenic | 0.8956 | pathogenic | -1.417 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
V/G | 0.9718 | likely_pathogenic | 0.9781 | pathogenic | -3.074 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | D | 0.562646161 | None | None | N |
V/H | 0.9988 | likely_pathogenic | 0.999 | pathogenic | -2.996 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
V/I | 0.087 | likely_benign | 0.0835 | benign | -0.592 | Destabilizing | 0.813 | D | 0.323 | neutral | None | None | None | None | N |
V/K | 0.9965 | likely_pathogenic | 0.9973 | pathogenic | -2.134 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
V/L | 0.4719 | ambiguous | 0.483 | ambiguous | -0.592 | Destabilizing | 0.981 | D | 0.575 | neutral | N | 0.484434881 | None | None | N |
V/M | 0.6505 | likely_pathogenic | 0.6911 | pathogenic | -0.847 | Destabilizing | 0.999 | D | 0.757 | deleterious | D | 0.539261987 | None | None | N |
V/N | 0.9972 | likely_pathogenic | 0.998 | pathogenic | -2.852 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
V/P | 0.9952 | likely_pathogenic | 0.9965 | pathogenic | -1.189 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
V/Q | 0.9947 | likely_pathogenic | 0.9959 | pathogenic | -2.474 | Highly Destabilizing | 1.0 | D | 0.918 | deleterious | None | None | None | None | N |
V/R | 0.9931 | likely_pathogenic | 0.9943 | pathogenic | -2.218 | Highly Destabilizing | 1.0 | D | 0.914 | deleterious | None | None | None | None | N |
V/S | 0.9832 | likely_pathogenic | 0.9878 | pathogenic | -3.386 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/T | 0.8951 | likely_pathogenic | 0.9164 | pathogenic | -2.886 | Highly Destabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | N |
V/W | 0.998 | likely_pathogenic | 0.9981 | pathogenic | -2.017 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/Y | 0.9938 | likely_pathogenic | 0.9943 | pathogenic | -1.672 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.