Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21685 | 65278;65279;65280 | chr2:178584498;178584497;178584496 | chr2:179449225;179449224;179449223 |
N2AB | 20044 | 60355;60356;60357 | chr2:178584498;178584497;178584496 | chr2:179449225;179449224;179449223 |
N2A | 19117 | 57574;57575;57576 | chr2:178584498;178584497;178584496 | chr2:179449225;179449224;179449223 |
N2B | 12620 | 38083;38084;38085 | chr2:178584498;178584497;178584496 | chr2:179449225;179449224;179449223 |
Novex-1 | 12745 | 38458;38459;38460 | chr2:178584498;178584497;178584496 | chr2:179449225;179449224;179449223 |
Novex-2 | 12812 | 38659;38660;38661 | chr2:178584498;178584497;178584496 | chr2:179449225;179449224;179449223 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | rs1335760990 | -0.389 | 0.961 | N | 0.417 | 0.162 | 0.234412748748 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
S/G | rs1335760990 | -0.389 | 0.961 | N | 0.417 | 0.162 | 0.234412748748 | gnomAD-4.0.0 | 3.18492E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86632E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0927 | likely_benign | 0.0841 | benign | -0.514 | Destabilizing | 0.931 | D | 0.453 | neutral | None | None | None | None | I |
S/C | 0.106 | likely_benign | 0.0953 | benign | -0.234 | Destabilizing | 1.0 | D | 0.532 | neutral | N | 0.469897073 | None | None | I |
S/D | 0.2655 | likely_benign | 0.2663 | benign | -0.088 | Destabilizing | 0.942 | D | 0.41 | neutral | None | None | None | None | I |
S/E | 0.3992 | ambiguous | 0.3875 | ambiguous | -0.19 | Destabilizing | 0.97 | D | 0.422 | neutral | None | None | None | None | I |
S/F | 0.1788 | likely_benign | 0.1588 | benign | -1.218 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | I |
S/G | 0.1186 | likely_benign | 0.1067 | benign | -0.598 | Destabilizing | 0.961 | D | 0.417 | neutral | N | 0.476938824 | None | None | I |
S/H | 0.2296 | likely_benign | 0.2293 | benign | -1.215 | Destabilizing | 0.999 | D | 0.505 | neutral | None | None | None | None | I |
S/I | 0.1552 | likely_benign | 0.1526 | benign | -0.418 | Destabilizing | 0.989 | D | 0.661 | neutral | N | 0.465262264 | None | None | I |
S/K | 0.4917 | ambiguous | 0.4971 | ambiguous | -0.448 | Destabilizing | 0.97 | D | 0.425 | neutral | None | None | None | None | I |
S/L | 0.1076 | likely_benign | 0.097 | benign | -0.418 | Destabilizing | 0.97 | D | 0.555 | neutral | None | None | None | None | I |
S/M | 0.1817 | likely_benign | 0.166 | benign | 0.063 | Stabilizing | 1.0 | D | 0.505 | neutral | None | None | None | None | I |
S/N | 0.1182 | likely_benign | 0.1096 | benign | -0.176 | Destabilizing | 0.248 | N | 0.264 | neutral | N | 0.432531898 | None | None | I |
S/P | 0.8297 | likely_pathogenic | 0.8494 | pathogenic | -0.424 | Destabilizing | 0.999 | D | 0.497 | neutral | None | None | None | None | I |
S/Q | 0.3887 | ambiguous | 0.3846 | ambiguous | -0.502 | Destabilizing | 0.996 | D | 0.423 | neutral | None | None | None | None | I |
S/R | 0.4269 | ambiguous | 0.4339 | ambiguous | -0.231 | Destabilizing | 0.994 | D | 0.499 | neutral | N | 0.501565122 | None | None | I |
S/T | 0.0739 | likely_benign | 0.0732 | benign | -0.284 | Destabilizing | 0.248 | N | 0.209 | neutral | N | 0.492849639 | None | None | I |
S/V | 0.1595 | likely_benign | 0.1505 | benign | -0.424 | Destabilizing | 0.991 | D | 0.562 | neutral | None | None | None | None | I |
S/W | 0.3288 | likely_benign | 0.3222 | benign | -1.197 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
S/Y | 0.1667 | likely_benign | 0.1554 | benign | -0.921 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.