Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21692 | 65299;65300;65301 | chr2:178584477;178584476;178584475 | chr2:179449204;179449203;179449202 |
N2AB | 20051 | 60376;60377;60378 | chr2:178584477;178584476;178584475 | chr2:179449204;179449203;179449202 |
N2A | 19124 | 57595;57596;57597 | chr2:178584477;178584476;178584475 | chr2:179449204;179449203;179449202 |
N2B | 12627 | 38104;38105;38106 | chr2:178584477;178584476;178584475 | chr2:179449204;179449203;179449202 |
Novex-1 | 12752 | 38479;38480;38481 | chr2:178584477;178584476;178584475 | chr2:179449204;179449203;179449202 |
Novex-2 | 12819 | 38680;38681;38682 | chr2:178584477;178584476;178584475 | chr2:179449204;179449203;179449202 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs758476009 | -0.591 | 0.001 | N | 0.13 | 0.129 | 0.402043589563 | gnomAD-2.1.1 | 1.03674E-04 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 7.99744E-04 | 7.04E-05 | 0 |
I/V | rs758476009 | -0.591 | 0.001 | N | 0.13 | 0.129 | 0.402043589563 | gnomAD-3.1.2 | 5.26E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 4.7081E-04 | 0 | 4.41E-05 | 0 | 0 |
I/V | rs758476009 | -0.591 | 0.001 | N | 0.13 | 0.129 | 0.402043589563 | gnomAD-4.0.0 | 1.06004E-04 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 7.81079E-04 | 0 | 9.83439E-05 | 0 | 8.00948E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1074 | likely_benign | 0.1068 | benign | -1.227 | Destabilizing | 0.002 | N | 0.24 | neutral | None | None | None | None | I |
I/C | 0.5086 | ambiguous | 0.4451 | ambiguous | -0.748 | Destabilizing | 0.245 | N | 0.271 | neutral | None | None | None | None | I |
I/D | 0.4981 | ambiguous | 0.4273 | ambiguous | -0.42 | Destabilizing | 0.018 | N | 0.336 | neutral | None | None | None | None | I |
I/E | 0.3628 | ambiguous | 0.3067 | benign | -0.446 | Destabilizing | 0.018 | N | 0.33 | neutral | None | None | None | None | I |
I/F | 0.1572 | likely_benign | 0.1423 | benign | -0.847 | Destabilizing | 0.065 | N | 0.219 | neutral | N | 0.467659028 | None | None | I |
I/G | 0.3703 | ambiguous | 0.3412 | ambiguous | -1.504 | Destabilizing | 0.008 | N | 0.306 | neutral | None | None | None | None | I |
I/H | 0.3388 | likely_benign | 0.2958 | benign | -0.639 | Destabilizing | 0.497 | N | 0.333 | neutral | None | None | None | None | I |
I/K | 0.2627 | likely_benign | 0.2363 | benign | -0.736 | Destabilizing | 0.018 | N | 0.323 | neutral | None | None | None | None | I |
I/L | 0.0709 | likely_benign | 0.0701 | benign | -0.571 | Destabilizing | 0.001 | N | 0.209 | neutral | N | 0.409676468 | None | None | I |
I/M | 0.0728 | likely_benign | 0.0678 | benign | -0.494 | Destabilizing | 0.196 | N | 0.303 | neutral | N | 0.49121763 | None | None | I |
I/N | 0.1514 | likely_benign | 0.1309 | benign | -0.519 | Destabilizing | 0.014 | N | 0.339 | neutral | N | 0.475440101 | None | None | I |
I/P | 0.6941 | likely_pathogenic | 0.7201 | pathogenic | -0.756 | Destabilizing | 0.037 | N | 0.318 | neutral | None | None | None | None | I |
I/Q | 0.2491 | likely_benign | 0.2254 | benign | -0.695 | Destabilizing | 0.085 | N | 0.427 | neutral | None | None | None | None | I |
I/R | 0.197 | likely_benign | 0.1808 | benign | -0.159 | Destabilizing | 0.044 | N | 0.369 | neutral | None | None | None | None | I |
I/S | 0.1029 | likely_benign | 0.0963 | benign | -1.12 | Destabilizing | None | N | 0.155 | neutral | N | 0.43247597 | None | None | I |
I/T | 0.0458 | likely_benign | 0.0441 | benign | -1.027 | Destabilizing | None | N | 0.135 | neutral | N | 0.327769948 | None | None | I |
I/V | 0.0788 | likely_benign | 0.073 | benign | -0.756 | Destabilizing | 0.001 | N | 0.13 | neutral | N | 0.428878305 | None | None | I |
I/W | 0.6841 | likely_pathogenic | 0.6378 | pathogenic | -0.872 | Destabilizing | 0.788 | D | 0.307 | neutral | None | None | None | None | I |
I/Y | 0.422 | ambiguous | 0.3771 | ambiguous | -0.653 | Destabilizing | 0.085 | N | 0.387 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.