Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21705 | 65338;65339;65340 | chr2:178584438;178584437;178584436 | chr2:179449165;179449164;179449163 |
N2AB | 20064 | 60415;60416;60417 | chr2:178584438;178584437;178584436 | chr2:179449165;179449164;179449163 |
N2A | 19137 | 57634;57635;57636 | chr2:178584438;178584437;178584436 | chr2:179449165;179449164;179449163 |
N2B | 12640 | 38143;38144;38145 | chr2:178584438;178584437;178584436 | chr2:179449165;179449164;179449163 |
Novex-1 | 12765 | 38518;38519;38520 | chr2:178584438;178584437;178584436 | chr2:179449165;179449164;179449163 |
Novex-2 | 12832 | 38719;38720;38721 | chr2:178584438;178584437;178584436 | chr2:179449165;179449164;179449163 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/Q | rs2154179812 | None | 1.0 | N | 0.699 | 0.477 | 0.808029720589 | gnomAD-4.0.0 | 1.50565E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.9792E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8139 | likely_pathogenic | 0.7813 | pathogenic | -0.664 | Destabilizing | 0.999 | D | 0.563 | neutral | None | None | None | None | I |
L/C | 0.8701 | likely_pathogenic | 0.8433 | pathogenic | -0.692 | Destabilizing | 1.0 | D | 0.638 | neutral | None | None | None | None | I |
L/D | 0.9798 | likely_pathogenic | 0.974 | pathogenic | -0.185 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
L/E | 0.8995 | likely_pathogenic | 0.8774 | pathogenic | -0.24 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
L/F | 0.5878 | likely_pathogenic | 0.5492 | ambiguous | -0.573 | Destabilizing | 1.0 | D | 0.591 | neutral | None | None | None | None | I |
L/G | 0.9324 | likely_pathogenic | 0.9219 | pathogenic | -0.83 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
L/H | 0.7274 | likely_pathogenic | 0.6748 | pathogenic | 0.062 | Stabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
L/I | 0.2871 | likely_benign | 0.2636 | benign | -0.327 | Destabilizing | 0.999 | D | 0.487 | neutral | None | None | None | None | I |
L/K | 0.7528 | likely_pathogenic | 0.7142 | pathogenic | -0.351 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
L/M | 0.3078 | likely_benign | 0.2808 | benign | -0.599 | Destabilizing | 1.0 | D | 0.551 | neutral | N | 0.520655102 | None | None | I |
L/N | 0.8755 | likely_pathogenic | 0.841 | pathogenic | -0.258 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
L/P | 0.9523 | likely_pathogenic | 0.9524 | pathogenic | -0.41 | Destabilizing | 1.0 | D | 0.744 | deleterious | N | 0.516729363 | None | None | I |
L/Q | 0.5754 | likely_pathogenic | 0.4818 | ambiguous | -0.411 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | N | 0.488387968 | None | None | I |
L/R | 0.6115 | likely_pathogenic | 0.538 | ambiguous | 0.158 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | N | 0.431361249 | None | None | I |
L/S | 0.8819 | likely_pathogenic | 0.8648 | pathogenic | -0.709 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
L/T | 0.8037 | likely_pathogenic | 0.7779 | pathogenic | -0.654 | Destabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | I |
L/V | 0.3719 | ambiguous | 0.3276 | benign | -0.41 | Destabilizing | 0.999 | D | 0.538 | neutral | N | 0.489428118 | None | None | I |
L/W | 0.7681 | likely_pathogenic | 0.7423 | pathogenic | -0.588 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
L/Y | 0.7855 | likely_pathogenic | 0.7477 | pathogenic | -0.359 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.