Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21735 | 65428;65429;65430 | chr2:178584348;178584347;178584346 | chr2:179449075;179449074;179449073 |
N2AB | 20094 | 60505;60506;60507 | chr2:178584348;178584347;178584346 | chr2:179449075;179449074;179449073 |
N2A | 19167 | 57724;57725;57726 | chr2:178584348;178584347;178584346 | chr2:179449075;179449074;179449073 |
N2B | 12670 | 38233;38234;38235 | chr2:178584348;178584347;178584346 | chr2:179449075;179449074;179449073 |
Novex-1 | 12795 | 38608;38609;38610 | chr2:178584348;178584347;178584346 | chr2:179449075;179449074;179449073 |
Novex-2 | 12862 | 38809;38810;38811 | chr2:178584348;178584347;178584346 | chr2:179449075;179449074;179449073 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1430331721 | -1.715 | 0.997 | N | 0.674 | 0.376 | 0.542187413537 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.5012 | ambiguous | 0.4019 | ambiguous | -3.326 | Highly Destabilizing | 0.525 | D | 0.594 | neutral | None | None | None | None | N |
Y/C | 0.1297 | likely_benign | 0.1081 | benign | -1.724 | Destabilizing | 0.997 | D | 0.674 | neutral | N | 0.434902987 | None | None | N |
Y/D | 0.7612 | likely_pathogenic | 0.6644 | pathogenic | -2.865 | Highly Destabilizing | 0.801 | D | 0.623 | neutral | D | 0.522020539 | None | None | N |
Y/E | 0.8564 | likely_pathogenic | 0.7858 | pathogenic | -2.734 | Highly Destabilizing | 0.842 | D | 0.621 | neutral | None | None | None | None | N |
Y/F | 0.0975 | likely_benign | 0.0919 | benign | -1.383 | Destabilizing | 0.891 | D | 0.657 | neutral | N | 0.430611888 | None | None | N |
Y/G | 0.6398 | likely_pathogenic | 0.5318 | ambiguous | -3.675 | Highly Destabilizing | 0.728 | D | 0.638 | neutral | None | None | None | None | N |
Y/H | 0.1938 | likely_benign | 0.1507 | benign | -1.93 | Destabilizing | 0.989 | D | 0.661 | neutral | D | 0.522020539 | None | None | N |
Y/I | 0.4086 | ambiguous | 0.3744 | ambiguous | -2.189 | Highly Destabilizing | 0.067 | N | 0.433 | neutral | None | None | None | None | N |
Y/K | 0.7371 | likely_pathogenic | 0.6329 | pathogenic | -1.987 | Destabilizing | 0.842 | D | 0.619 | neutral | None | None | None | None | N |
Y/L | 0.465 | ambiguous | 0.4011 | ambiguous | -2.189 | Highly Destabilizing | 0.525 | D | 0.601 | neutral | None | None | None | None | N |
Y/M | 0.494 | ambiguous | 0.4608 | ambiguous | -1.794 | Destabilizing | 0.974 | D | 0.654 | neutral | None | None | None | None | N |
Y/N | 0.3345 | likely_benign | 0.2894 | benign | -2.419 | Highly Destabilizing | 0.801 | D | 0.625 | neutral | N | 0.50316542 | None | None | N |
Y/P | 0.9896 | likely_pathogenic | 0.9841 | pathogenic | -2.576 | Highly Destabilizing | 0.974 | D | 0.673 | neutral | None | None | None | None | N |
Y/Q | 0.5568 | ambiguous | 0.4594 | ambiguous | -2.377 | Highly Destabilizing | 0.974 | D | 0.647 | neutral | None | None | None | None | N |
Y/R | 0.4937 | ambiguous | 0.3688 | ambiguous | -1.398 | Destabilizing | 0.949 | D | 0.661 | neutral | None | None | None | None | N |
Y/S | 0.1752 | likely_benign | 0.1484 | benign | -2.887 | Highly Destabilizing | 0.007 | N | 0.487 | neutral | N | 0.361039947 | None | None | N |
Y/T | 0.3445 | ambiguous | 0.299 | benign | -2.661 | Highly Destabilizing | 0.728 | D | 0.642 | neutral | None | None | None | None | N |
Y/V | 0.349 | ambiguous | 0.3146 | benign | -2.576 | Highly Destabilizing | 0.525 | D | 0.613 | neutral | None | None | None | None | N |
Y/W | 0.4867 | ambiguous | 0.4108 | ambiguous | -0.72 | Destabilizing | 0.998 | D | 0.654 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.