Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21739 | 65440;65441;65442 | chr2:178584336;178584335;178584334 | chr2:179449063;179449062;179449061 |
N2AB | 20098 | 60517;60518;60519 | chr2:178584336;178584335;178584334 | chr2:179449063;179449062;179449061 |
N2A | 19171 | 57736;57737;57738 | chr2:178584336;178584335;178584334 | chr2:179449063;179449062;179449061 |
N2B | 12674 | 38245;38246;38247 | chr2:178584336;178584335;178584334 | chr2:179449063;179449062;179449061 |
Novex-1 | 12799 | 38620;38621;38622 | chr2:178584336;178584335;178584334 | chr2:179449063;179449062;179449061 |
Novex-2 | 12866 | 38821;38822;38823 | chr2:178584336;178584335;178584334 | chr2:179449063;179449062;179449061 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1457832691 | 0.236 | 0.324 | N | 0.34 | 0.12 | 0.204665344411 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | I | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/N | rs1457832691 | 0.236 | 0.324 | N | 0.34 | 0.12 | 0.204665344411 | gnomAD-4.0.0 | 1.60857E-06 | None | None | None | None | I | None | 0 | 2.29495E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5199 | ambiguous | 0.4357 | ambiguous | 0.049 | Stabilizing | 0.207 | N | 0.456 | neutral | None | None | None | None | I |
K/C | 0.8624 | likely_pathogenic | 0.7816 | pathogenic | -0.235 | Destabilizing | 0.981 | D | 0.439 | neutral | None | None | None | None | I |
K/D | 0.8045 | likely_pathogenic | 0.7439 | pathogenic | -0.018 | Destabilizing | 0.388 | N | 0.464 | neutral | None | None | None | None | I |
K/E | 0.3315 | likely_benign | 0.282 | benign | -0.015 | Destabilizing | 0.09 | N | 0.367 | neutral | N | 0.448234857 | None | None | I |
K/F | 0.9099 | likely_pathogenic | 0.8661 | pathogenic | -0.209 | Destabilizing | 0.69 | D | 0.495 | neutral | None | None | None | None | I |
K/G | 0.7173 | likely_pathogenic | 0.6339 | pathogenic | -0.129 | Destabilizing | 0.388 | N | 0.537 | neutral | None | None | None | None | I |
K/H | 0.4969 | ambiguous | 0.4128 | ambiguous | -0.361 | Destabilizing | 0.818 | D | 0.409 | neutral | None | None | None | None | I |
K/I | 0.5236 | ambiguous | 0.4475 | ambiguous | 0.437 | Stabilizing | 0.193 | N | 0.529 | neutral | N | 0.440367522 | None | None | I |
K/L | 0.4411 | ambiguous | 0.3557 | ambiguous | 0.437 | Stabilizing | 0.002 | N | 0.253 | neutral | None | None | None | None | I |
K/M | 0.3563 | ambiguous | 0.3015 | benign | 0.153 | Stabilizing | 0.054 | N | 0.401 | neutral | None | None | None | None | I |
K/N | 0.6697 | likely_pathogenic | 0.6059 | pathogenic | 0.194 | Stabilizing | 0.324 | N | 0.34 | neutral | N | 0.491409631 | None | None | I |
K/P | 0.8381 | likely_pathogenic | 0.7726 | pathogenic | 0.335 | Stabilizing | 0.818 | D | 0.442 | neutral | None | None | None | None | I |
K/Q | 0.2066 | likely_benign | 0.1743 | benign | 0.047 | Stabilizing | 0.018 | N | 0.294 | neutral | N | 0.436999143 | None | None | I |
K/R | 0.0818 | likely_benign | 0.0752 | benign | -0.029 | Destabilizing | 0.001 | N | 0.125 | neutral | N | 0.429630453 | None | None | I |
K/S | 0.6589 | likely_pathogenic | 0.5796 | pathogenic | -0.24 | Destabilizing | 0.388 | N | 0.317 | neutral | None | None | None | None | I |
K/T | 0.3572 | ambiguous | 0.3031 | benign | -0.096 | Destabilizing | 0.324 | N | 0.493 | neutral | N | 0.453448675 | None | None | I |
K/V | 0.4743 | ambiguous | 0.3958 | ambiguous | 0.335 | Stabilizing | 0.241 | N | 0.519 | neutral | None | None | None | None | I |
K/W | 0.9012 | likely_pathogenic | 0.8513 | pathogenic | -0.269 | Destabilizing | 0.981 | D | 0.465 | neutral | None | None | None | None | I |
K/Y | 0.7965 | likely_pathogenic | 0.7193 | pathogenic | 0.093 | Stabilizing | 0.818 | D | 0.499 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.