Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21752 | 65479;65480;65481 | chr2:178584297;178584296;178584295 | chr2:179449024;179449023;179449022 |
N2AB | 20111 | 60556;60557;60558 | chr2:178584297;178584296;178584295 | chr2:179449024;179449023;179449022 |
N2A | 19184 | 57775;57776;57777 | chr2:178584297;178584296;178584295 | chr2:179449024;179449023;179449022 |
N2B | 12687 | 38284;38285;38286 | chr2:178584297;178584296;178584295 | chr2:179449024;179449023;179449022 |
Novex-1 | 12812 | 38659;38660;38661 | chr2:178584297;178584296;178584295 | chr2:179449024;179449023;179449022 |
Novex-2 | 12879 | 38860;38861;38862 | chr2:178584297;178584296;178584295 | chr2:179449024;179449023;179449022 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.506 | N | 0.417 | 0.206 | 0.568285537894 | gnomAD-4.0.0 | 1.04784E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.37055E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3785 | ambiguous | 0.2978 | benign | -1.519 | Destabilizing | 0.824 | D | 0.591 | neutral | N | 0.477770658 | None | None | N |
V/C | 0.7493 | likely_pathogenic | 0.7074 | pathogenic | -1.139 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
V/D | 0.8285 | likely_pathogenic | 0.752 | pathogenic | -1.119 | Destabilizing | 0.997 | D | 0.85 | deleterious | None | None | None | None | N |
V/E | 0.6033 | likely_pathogenic | 0.5147 | ambiguous | -1.012 | Destabilizing | 0.996 | D | 0.794 | deleterious | N | 0.489545037 | None | None | N |
V/F | 0.3083 | likely_benign | 0.2498 | benign | -0.901 | Destabilizing | 0.991 | D | 0.771 | deleterious | None | None | None | None | N |
V/G | 0.5594 | ambiguous | 0.4846 | ambiguous | -1.943 | Destabilizing | 0.996 | D | 0.807 | deleterious | N | 0.490305506 | None | None | N |
V/H | 0.7923 | likely_pathogenic | 0.7216 | pathogenic | -1.33 | Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
V/I | 0.0958 | likely_benign | 0.0843 | benign | -0.41 | Destabilizing | 0.06 | N | 0.207 | neutral | N | 0.476437391 | None | None | N |
V/K | 0.6271 | likely_pathogenic | 0.5317 | ambiguous | -1.226 | Destabilizing | 0.997 | D | 0.801 | deleterious | None | None | None | None | N |
V/L | 0.3379 | likely_benign | 0.2729 | benign | -0.41 | Destabilizing | 0.506 | D | 0.417 | neutral | N | 0.517822654 | None | None | N |
V/M | 0.2308 | likely_benign | 0.1862 | benign | -0.425 | Destabilizing | 0.991 | D | 0.651 | prob.neutral | None | None | None | None | N |
V/N | 0.7092 | likely_pathogenic | 0.6137 | pathogenic | -1.275 | Destabilizing | 0.997 | D | 0.827 | deleterious | None | None | None | None | N |
V/P | 0.9716 | likely_pathogenic | 0.9567 | pathogenic | -0.746 | Destabilizing | 0.997 | D | 0.815 | deleterious | None | None | None | None | N |
V/Q | 0.5001 | ambiguous | 0.4321 | ambiguous | -1.252 | Destabilizing | 0.997 | D | 0.789 | deleterious | None | None | None | None | N |
V/R | 0.5318 | ambiguous | 0.456 | ambiguous | -0.887 | Destabilizing | 0.997 | D | 0.83 | deleterious | None | None | None | None | N |
V/S | 0.5155 | ambiguous | 0.4393 | ambiguous | -1.942 | Destabilizing | 0.997 | D | 0.723 | deleterious | None | None | None | None | N |
V/T | 0.3102 | likely_benign | 0.2533 | benign | -1.689 | Destabilizing | 0.968 | D | 0.669 | prob.neutral | None | None | None | None | N |
V/W | 0.9311 | likely_pathogenic | 0.8903 | pathogenic | -1.164 | Destabilizing | 0.999 | D | 0.729 | deleterious | None | None | None | None | N |
V/Y | 0.7562 | likely_pathogenic | 0.6783 | pathogenic | -0.819 | Destabilizing | 0.997 | D | 0.748 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.