Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21758 | 65497;65498;65499 | chr2:178584279;178584278;178584277 | chr2:179449006;179449005;179449004 |
N2AB | 20117 | 60574;60575;60576 | chr2:178584279;178584278;178584277 | chr2:179449006;179449005;179449004 |
N2A | 19190 | 57793;57794;57795 | chr2:178584279;178584278;178584277 | chr2:179449006;179449005;179449004 |
N2B | 12693 | 38302;38303;38304 | chr2:178584279;178584278;178584277 | chr2:179449006;179449005;179449004 |
Novex-1 | 12818 | 38677;38678;38679 | chr2:178584279;178584278;178584277 | chr2:179449006;179449005;179449004 |
Novex-2 | 12885 | 38878;38879;38880 | chr2:178584279;178584278;178584277 | chr2:179449006;179449005;179449004 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.856 | N | 0.549 | 0.256 | 0.437207349437 | gnomAD-4.0.0 | 1.76645E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.12533E-06 | 0 | 0 |
V/F | rs1394549346 | None | 0.954 | N | 0.82 | 0.297 | 0.431822907236 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/F | rs1394549346 | None | 0.954 | N | 0.82 | 0.297 | 0.431822907236 | gnomAD-4.0.0 | 1.93389E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.69733E-07 | 2.47488E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5853 | likely_pathogenic | 0.4553 | ambiguous | -1.558 | Destabilizing | 0.856 | D | 0.549 | neutral | N | 0.512542625 | None | None | N |
V/C | 0.8663 | likely_pathogenic | 0.8204 | pathogenic | -1.325 | Destabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | N |
V/D | 0.9907 | likely_pathogenic | 0.9804 | pathogenic | -2.46 | Highly Destabilizing | 0.992 | D | 0.804 | deleterious | N | 0.482406965 | None | None | N |
V/E | 0.9772 | likely_pathogenic | 0.9583 | pathogenic | -2.451 | Highly Destabilizing | 0.994 | D | 0.82 | deleterious | None | None | None | None | N |
V/F | 0.8788 | likely_pathogenic | 0.7991 | pathogenic | -1.298 | Destabilizing | 0.954 | D | 0.82 | deleterious | N | 0.495517089 | None | None | N |
V/G | 0.8639 | likely_pathogenic | 0.7832 | pathogenic | -1.878 | Destabilizing | 0.977 | D | 0.817 | deleterious | N | 0.482153475 | None | None | N |
V/H | 0.995 | likely_pathogenic | 0.9889 | pathogenic | -1.492 | Destabilizing | 0.998 | D | 0.814 | deleterious | None | None | None | None | N |
V/I | 0.1232 | likely_benign | 0.1179 | benign | -0.754 | Destabilizing | 0.018 | N | 0.261 | neutral | N | 0.467559697 | None | None | N |
V/K | 0.9886 | likely_pathogenic | 0.9764 | pathogenic | -1.329 | Destabilizing | 0.982 | D | 0.823 | deleterious | None | None | None | None | N |
V/L | 0.6959 | likely_pathogenic | 0.633 | pathogenic | -0.754 | Destabilizing | 0.297 | N | 0.517 | neutral | N | 0.481086355 | None | None | N |
V/M | 0.6252 | likely_pathogenic | 0.5385 | ambiguous | -0.614 | Destabilizing | 0.965 | D | 0.731 | deleterious | None | None | None | None | N |
V/N | 0.9656 | likely_pathogenic | 0.9434 | pathogenic | -1.298 | Destabilizing | 0.994 | D | 0.805 | deleterious | None | None | None | None | N |
V/P | 0.8856 | likely_pathogenic | 0.7797 | pathogenic | -0.991 | Destabilizing | 0.994 | D | 0.825 | deleterious | None | None | None | None | N |
V/Q | 0.9749 | likely_pathogenic | 0.9549 | pathogenic | -1.508 | Destabilizing | 0.994 | D | 0.829 | deleterious | None | None | None | None | N |
V/R | 0.9765 | likely_pathogenic | 0.9566 | pathogenic | -0.833 | Destabilizing | 0.994 | D | 0.803 | deleterious | None | None | None | None | N |
V/S | 0.8291 | likely_pathogenic | 0.745 | pathogenic | -1.692 | Destabilizing | 0.982 | D | 0.825 | deleterious | None | None | None | None | N |
V/T | 0.608 | likely_pathogenic | 0.5105 | ambiguous | -1.584 | Destabilizing | 0.887 | D | 0.661 | prob.neutral | None | None | None | None | N |
V/W | 0.9968 | likely_pathogenic | 0.9925 | pathogenic | -1.578 | Destabilizing | 0.998 | D | 0.833 | deleterious | None | None | None | None | N |
V/Y | 0.9887 | likely_pathogenic | 0.9777 | pathogenic | -1.263 | Destabilizing | 0.982 | D | 0.816 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.