Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21801 | 65626;65627;65628 | chr2:178583781;178583780;178583779 | chr2:179448508;179448507;179448506 |
N2AB | 20160 | 60703;60704;60705 | chr2:178583781;178583780;178583779 | chr2:179448508;179448507;179448506 |
N2A | 19233 | 57922;57923;57924 | chr2:178583781;178583780;178583779 | chr2:179448508;179448507;179448506 |
N2B | 12736 | 38431;38432;38433 | chr2:178583781;178583780;178583779 | chr2:179448508;179448507;179448506 |
Novex-1 | 12861 | 38806;38807;38808 | chr2:178583781;178583780;178583779 | chr2:179448508;179448507;179448506 |
Novex-2 | 12928 | 39007;39008;39009 | chr2:178583781;178583780;178583779 | chr2:179448508;179448507;179448506 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | None | None | 0.811 | N | 0.306 | 0.27 | 0.239305524855 | gnomAD-4.0.0 | 1.59823E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86832E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1685 | likely_benign | 0.146 | benign | -0.279 | Destabilizing | 0.64 | D | 0.361 | neutral | N | 0.459569358 | None | None | N |
G/C | 0.3363 | likely_benign | 0.2808 | benign | -0.871 | Destabilizing | 0.125 | N | 0.434 | neutral | N | 0.499364995 | None | None | N |
G/D | 0.2032 | likely_benign | 0.1868 | benign | -0.751 | Destabilizing | 0.811 | D | 0.306 | neutral | N | 0.459163926 | None | None | N |
G/E | 0.204 | likely_benign | 0.181 | benign | -0.919 | Destabilizing | 0.132 | N | 0.261 | neutral | None | None | None | None | N |
G/F | 0.6587 | likely_pathogenic | 0.6279 | pathogenic | -1.058 | Destabilizing | 0.988 | D | 0.553 | neutral | None | None | None | None | N |
G/H | 0.4552 | ambiguous | 0.4282 | ambiguous | -0.489 | Destabilizing | 0.999 | D | 0.496 | neutral | None | None | None | None | N |
G/I | 0.459 | ambiguous | 0.3886 | ambiguous | -0.486 | Destabilizing | 0.976 | D | 0.55 | neutral | None | None | None | None | N |
G/K | 0.3938 | ambiguous | 0.3825 | ambiguous | -0.86 | Destabilizing | 0.919 | D | 0.391 | neutral | None | None | None | None | N |
G/L | 0.496 | ambiguous | 0.4321 | ambiguous | -0.486 | Destabilizing | 0.952 | D | 0.511 | neutral | None | None | None | None | N |
G/M | 0.517 | ambiguous | 0.4797 | ambiguous | -0.569 | Destabilizing | 0.999 | D | 0.57 | neutral | None | None | None | None | N |
G/N | 0.2644 | likely_benign | 0.2528 | benign | -0.469 | Destabilizing | 0.976 | D | 0.368 | neutral | None | None | None | None | N |
G/P | 0.7955 | likely_pathogenic | 0.7788 | pathogenic | -0.387 | Destabilizing | 0.988 | D | 0.481 | neutral | None | None | None | None | N |
G/Q | 0.3211 | likely_benign | 0.2965 | benign | -0.766 | Destabilizing | 0.976 | D | 0.47 | neutral | None | None | None | None | N |
G/R | 0.3231 | likely_benign | 0.3036 | benign | -0.388 | Destabilizing | 0.968 | D | 0.471 | neutral | N | 0.515769357 | None | None | N |
G/S | 0.1287 | likely_benign | 0.1078 | benign | -0.568 | Destabilizing | 0.251 | N | 0.239 | neutral | N | 0.424165918 | None | None | N |
G/T | 0.1802 | likely_benign | 0.1565 | benign | -0.675 | Destabilizing | 0.851 | D | 0.392 | neutral | None | None | None | None | N |
G/V | 0.2963 | likely_benign | 0.2379 | benign | -0.387 | Destabilizing | 0.968 | D | 0.513 | neutral | N | 0.519695097 | None | None | N |
G/W | 0.5305 | ambiguous | 0.4886 | ambiguous | -1.195 | Destabilizing | 0.999 | D | 0.595 | neutral | None | None | None | None | N |
G/Y | 0.5562 | ambiguous | 0.5051 | ambiguous | -0.87 | Destabilizing | 0.996 | D | 0.555 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.