Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21803 | 65632;65633;65634 | chr2:178583775;178583774;178583773 | chr2:179448502;179448501;179448500 |
N2AB | 20162 | 60709;60710;60711 | chr2:178583775;178583774;178583773 | chr2:179448502;179448501;179448500 |
N2A | 19235 | 57928;57929;57930 | chr2:178583775;178583774;178583773 | chr2:179448502;179448501;179448500 |
N2B | 12738 | 38437;38438;38439 | chr2:178583775;178583774;178583773 | chr2:179448502;179448501;179448500 |
Novex-1 | 12863 | 38812;38813;38814 | chr2:178583775;178583774;178583773 | chr2:179448502;179448501;179448500 |
Novex-2 | 12930 | 39013;39014;39015 | chr2:178583775;178583774;178583773 | chr2:179448502;179448501;179448500 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.41 | N | 0.535 | 0.126 | 0.222439326576 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
K/T | rs2048309985 | None | 0.83 | N | 0.507 | 0.251 | 0.352476196916 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/T | rs2048309985 | None | 0.83 | N | 0.507 | 0.251 | 0.352476196916 | gnomAD-4.0.0 | 6.57549E-06 | None | None | None | None | N | None | 2.41301E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3334 | likely_benign | 0.3114 | benign | 0.063 | Stabilizing | 0.48 | N | 0.523 | neutral | None | None | None | None | N |
K/C | 0.7149 | likely_pathogenic | 0.6373 | pathogenic | -0.117 | Destabilizing | 0.993 | D | 0.708 | prob.delet. | None | None | None | None | N |
K/D | 0.545 | ambiguous | 0.5286 | ambiguous | -0.009 | Destabilizing | 0.866 | D | 0.497 | neutral | None | None | None | None | N |
K/E | 0.2172 | likely_benign | 0.1994 | benign | 0.001 | Stabilizing | 0.41 | N | 0.541 | neutral | N | 0.414082211 | None | None | N |
K/F | 0.8225 | likely_pathogenic | 0.7743 | pathogenic | -0.12 | Destabilizing | 0.993 | D | 0.634 | neutral | None | None | None | None | N |
K/G | 0.4543 | ambiguous | 0.4421 | ambiguous | -0.137 | Destabilizing | 0.866 | D | 0.455 | neutral | None | None | None | None | N |
K/H | 0.3195 | likely_benign | 0.2648 | benign | -0.392 | Destabilizing | 0.961 | D | 0.572 | neutral | None | None | None | None | N |
K/I | 0.4125 | ambiguous | 0.3598 | ambiguous | 0.513 | Stabilizing | 0.908 | D | 0.633 | neutral | N | 0.497471598 | None | None | N |
K/L | 0.4231 | ambiguous | 0.3763 | ambiguous | 0.513 | Stabilizing | 0.866 | D | 0.455 | neutral | None | None | None | None | N |
K/M | 0.3216 | likely_benign | 0.2798 | benign | 0.21 | Stabilizing | 0.98 | D | 0.577 | neutral | None | None | None | None | N |
K/N | 0.3901 | ambiguous | 0.3621 | ambiguous | 0.273 | Stabilizing | 0.83 | D | 0.575 | neutral | N | 0.475421458 | None | None | N |
K/P | 0.6129 | likely_pathogenic | 0.78 | pathogenic | 0.391 | Stabilizing | 0.929 | D | 0.53 | neutral | None | None | None | None | N |
K/Q | 0.1422 | likely_benign | 0.1228 | benign | 0.127 | Stabilizing | 0.01 | N | 0.352 | neutral | N | 0.475074741 | None | None | N |
K/R | 0.0869 | likely_benign | 0.0773 | benign | -0.033 | Destabilizing | 0.41 | N | 0.535 | neutral | N | 0.450197726 | None | None | N |
K/S | 0.3818 | ambiguous | 0.3553 | ambiguous | -0.155 | Destabilizing | 0.48 | N | 0.554 | neutral | None | None | None | None | N |
K/T | 0.1644 | likely_benign | 0.1488 | benign | -0.002 | Destabilizing | 0.83 | D | 0.507 | neutral | N | 0.440943525 | None | None | N |
K/V | 0.354 | ambiguous | 0.312 | benign | 0.391 | Stabilizing | 0.866 | D | 0.541 | neutral | None | None | None | None | N |
K/W | 0.8436 | likely_pathogenic | 0.8042 | pathogenic | -0.172 | Destabilizing | 0.993 | D | 0.723 | prob.delet. | None | None | None | None | N |
K/Y | 0.6977 | likely_pathogenic | 0.6265 | pathogenic | 0.176 | Stabilizing | 0.929 | D | 0.579 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.