Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2184 | 6775;6776;6777 | chr2:178775161;178775160;178775159 | chr2:179639888;179639887;179639886 |
N2AB | 2184 | 6775;6776;6777 | chr2:178775161;178775160;178775159 | chr2:179639888;179639887;179639886 |
N2A | 2184 | 6775;6776;6777 | chr2:178775161;178775160;178775159 | chr2:179639888;179639887;179639886 |
N2B | 2138 | 6637;6638;6639 | chr2:178775161;178775160;178775159 | chr2:179639888;179639887;179639886 |
Novex-1 | 2138 | 6637;6638;6639 | chr2:178775161;178775160;178775159 | chr2:179639888;179639887;179639886 |
Novex-2 | 2138 | 6637;6638;6639 | chr2:178775161;178775160;178775159 | chr2:179639888;179639887;179639886 |
Novex-3 | 2184 | 6775;6776;6777 | chr2:178775161;178775160;178775159 | chr2:179639888;179639887;179639886 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | None | N | 0.069 | 0.136 | 0.302793454619 | gnomAD-4.0.0 | 1.59088E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1106 | likely_benign | 0.1066 | benign | -0.837 | Destabilizing | None | N | 0.069 | neutral | N | 0.498845922 | None | None | N |
V/C | 0.5953 | likely_pathogenic | 0.592 | pathogenic | -0.807 | Destabilizing | 0.665 | D | 0.33 | neutral | None | None | None | None | N |
V/D | 0.2363 | likely_benign | 0.2181 | benign | -0.779 | Destabilizing | 0.174 | N | 0.335 | neutral | N | 0.502778739 | None | None | N |
V/E | 0.1527 | likely_benign | 0.1439 | benign | -0.849 | Destabilizing | 0.103 | N | 0.285 | neutral | None | None | None | None | N |
V/F | 0.1166 | likely_benign | 0.113 | benign | -0.778 | Destabilizing | 0.095 | N | 0.373 | neutral | N | 0.512934434 | None | None | N |
V/G | 0.2011 | likely_benign | 0.191 | benign | -1.034 | Destabilizing | 0.042 | N | 0.267 | neutral | N | 0.515941783 | None | None | N |
V/H | 0.2903 | likely_benign | 0.2777 | benign | -0.48 | Destabilizing | 0.495 | N | 0.346 | neutral | None | None | None | None | N |
V/I | 0.0672 | likely_benign | 0.0669 | benign | -0.439 | Destabilizing | 0.08 | N | 0.226 | neutral | N | 0.498308001 | None | None | N |
V/K | 0.1445 | likely_benign | 0.1404 | benign | -0.919 | Destabilizing | 0.103 | N | 0.291 | neutral | None | None | None | None | N |
V/L | 0.1268 | likely_benign | 0.1212 | benign | -0.439 | Destabilizing | 0.019 | N | 0.213 | neutral | N | 0.506729759 | None | None | N |
V/M | 0.0992 | likely_benign | 0.0958 | benign | -0.494 | Destabilizing | 0.858 | D | 0.28 | neutral | None | None | None | None | N |
V/N | 0.1437 | likely_benign | 0.1353 | benign | -0.722 | Destabilizing | 0.218 | N | 0.397 | neutral | None | None | None | None | N |
V/P | 0.4464 | ambiguous | 0.4312 | ambiguous | -0.536 | Destabilizing | None | N | 0.174 | neutral | None | None | None | None | N |
V/Q | 0.172 | likely_benign | 0.165 | benign | -0.938 | Destabilizing | 0.362 | N | 0.396 | neutral | None | None | None | None | N |
V/R | 0.1471 | likely_benign | 0.144 | benign | -0.323 | Destabilizing | 0.218 | N | 0.428 | neutral | None | None | None | None | N |
V/S | 0.1215 | likely_benign | 0.116 | benign | -1.091 | Destabilizing | 0.005 | N | 0.16 | neutral | None | None | None | None | N |
V/T | 0.0803 | likely_benign | 0.0791 | benign | -1.063 | Destabilizing | 0.001 | N | 0.064 | neutral | None | None | None | None | N |
V/W | 0.6401 | likely_pathogenic | 0.6202 | pathogenic | -0.891 | Destabilizing | 0.882 | D | 0.327 | neutral | None | None | None | None | N |
V/Y | 0.3328 | likely_benign | 0.3205 | benign | -0.62 | Destabilizing | 0.004 | N | 0.242 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.