Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21848 | 65767;65768;65769 | chr2:178583640;178583639;178583638 | chr2:179448367;179448366;179448365 |
N2AB | 20207 | 60844;60845;60846 | chr2:178583640;178583639;178583638 | chr2:179448367;179448366;179448365 |
N2A | 19280 | 58063;58064;58065 | chr2:178583640;178583639;178583638 | chr2:179448367;179448366;179448365 |
N2B | 12783 | 38572;38573;38574 | chr2:178583640;178583639;178583638 | chr2:179448367;179448366;179448365 |
Novex-1 | 12908 | 38947;38948;38949 | chr2:178583640;178583639;178583638 | chr2:179448367;179448366;179448365 |
Novex-2 | 12975 | 39148;39149;39150 | chr2:178583640;178583639;178583638 | chr2:179448367;179448366;179448365 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1559520585 | None | 0.001 | N | 0.609 | 0.277 | 0.245660935333 | gnomAD-4.0.0 | 1.37214E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.53846E-05 | None | 0 | 0 | 0 | 0 | 1.66168E-05 |
P/T | None | None | 0.335 | N | 0.659 | 0.206 | 0.231873229951 | gnomAD-4.0.0 | 1.59783E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8685E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0892 | likely_benign | 0.0759 | benign | -1.804 | Destabilizing | 0.172 | N | 0.573 | neutral | N | 0.492908354 | None | None | N |
P/C | 0.5674 | likely_pathogenic | 0.4456 | ambiguous | -1.157 | Destabilizing | 0.991 | D | 0.809 | deleterious | None | None | None | None | N |
P/D | 0.6715 | likely_pathogenic | 0.6081 | pathogenic | -1.794 | Destabilizing | 0.4 | N | 0.643 | neutral | None | None | None | None | N |
P/E | 0.4073 | ambiguous | 0.3327 | benign | -1.771 | Destabilizing | 0.018 | N | 0.497 | neutral | None | None | None | None | N |
P/F | 0.6469 | likely_pathogenic | 0.5134 | ambiguous | -1.381 | Destabilizing | 0.824 | D | 0.753 | deleterious | None | None | None | None | N |
P/G | 0.5008 | ambiguous | 0.4251 | ambiguous | -2.152 | Highly Destabilizing | 0.4 | N | 0.683 | prob.neutral | None | None | None | None | N |
P/H | 0.4185 | ambiguous | 0.3108 | benign | -1.635 | Destabilizing | 0.988 | D | 0.773 | deleterious | N | 0.485154172 | None | None | N |
P/I | 0.2744 | likely_benign | 0.1915 | benign | -0.924 | Destabilizing | 0.4 | N | 0.678 | prob.neutral | None | None | None | None | N |
P/K | 0.4671 | ambiguous | 0.3561 | ambiguous | -1.395 | Destabilizing | 0.571 | D | 0.659 | prob.neutral | None | None | None | None | N |
P/L | 0.1506 | likely_benign | 0.1082 | benign | -0.924 | Destabilizing | 0.001 | N | 0.609 | neutral | N | 0.490849483 | None | None | N |
P/M | 0.3723 | ambiguous | 0.2723 | benign | -0.676 | Destabilizing | 0.824 | D | 0.757 | deleterious | None | None | None | None | N |
P/N | 0.5454 | ambiguous | 0.4522 | ambiguous | -1.213 | Destabilizing | 0.824 | D | 0.679 | prob.neutral | None | None | None | None | N |
P/Q | 0.2966 | likely_benign | 0.2096 | benign | -1.392 | Destabilizing | 0.824 | D | 0.679 | prob.neutral | None | None | None | None | N |
P/R | 0.3612 | ambiguous | 0.2663 | benign | -0.844 | Destabilizing | 0.779 | D | 0.685 | prob.delet. | N | 0.489420133 | None | None | N |
P/S | 0.2141 | likely_benign | 0.173 | benign | -1.759 | Destabilizing | 0.013 | N | 0.501 | neutral | N | 0.507549732 | None | None | N |
P/T | 0.1551 | likely_benign | 0.1181 | benign | -1.63 | Destabilizing | 0.335 | N | 0.659 | prob.neutral | N | 0.511955474 | None | None | N |
P/V | 0.1892 | likely_benign | 0.1395 | benign | -1.185 | Destabilizing | 0.4 | N | 0.648 | neutral | None | None | None | None | N |
P/W | 0.8309 | likely_pathogenic | 0.7398 | pathogenic | -1.586 | Destabilizing | 0.991 | D | 0.809 | deleterious | None | None | None | None | N |
P/Y | 0.6344 | likely_pathogenic | 0.5166 | ambiguous | -1.314 | Destabilizing | 0.966 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.