Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21895 | 65908;65909;65910 | chr2:178583120;178583119;178583118 | chr2:179447847;179447846;179447845 |
N2AB | 20254 | 60985;60986;60987 | chr2:178583120;178583119;178583118 | chr2:179447847;179447846;179447845 |
N2A | 19327 | 58204;58205;58206 | chr2:178583120;178583119;178583118 | chr2:179447847;179447846;179447845 |
N2B | 12830 | 38713;38714;38715 | chr2:178583120;178583119;178583118 | chr2:179447847;179447846;179447845 |
Novex-1 | 12955 | 39088;39089;39090 | chr2:178583120;178583119;178583118 | chr2:179447847;179447846;179447845 |
Novex-2 | 13022 | 39289;39290;39291 | chr2:178583120;178583119;178583118 | chr2:179447847;179447846;179447845 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.031 | D | 0.461 | 0.188 | 0.445007932271 | gnomAD-4.0.0 | 1.59553E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.865E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4631 | ambiguous | 0.41 | ambiguous | -1.344 | Destabilizing | 0.296 | N | 0.677 | prob.neutral | D | 0.548315324 | None | None | N |
V/C | 0.8609 | likely_pathogenic | 0.8306 | pathogenic | -0.7 | Destabilizing | 0.991 | D | 0.724 | prob.delet. | None | None | None | None | N |
V/D | 0.9616 | likely_pathogenic | 0.9479 | pathogenic | -1.162 | Destabilizing | 0.879 | D | 0.867 | deleterious | D | 0.615026942 | None | None | N |
V/E | 0.9066 | likely_pathogenic | 0.8862 | pathogenic | -1.171 | Destabilizing | 0.906 | D | 0.848 | deleterious | None | None | None | None | N |
V/F | 0.412 | ambiguous | 0.3525 | ambiguous | -1.141 | Destabilizing | 0.782 | D | 0.771 | deleterious | D | 0.546720532 | None | None | N |
V/G | 0.7317 | likely_pathogenic | 0.6745 | pathogenic | -1.647 | Destabilizing | 0.879 | D | 0.859 | deleterious | D | 0.615026942 | None | None | N |
V/H | 0.9529 | likely_pathogenic | 0.9351 | pathogenic | -1.261 | Destabilizing | 0.991 | D | 0.837 | deleterious | None | None | None | None | N |
V/I | 0.0771 | likely_benign | 0.0743 | benign | -0.611 | Destabilizing | 0.001 | N | 0.211 | neutral | N | 0.490661135 | None | None | N |
V/K | 0.9024 | likely_pathogenic | 0.879 | pathogenic | -1.045 | Destabilizing | 0.906 | D | 0.847 | deleterious | None | None | None | None | N |
V/L | 0.3426 | ambiguous | 0.281 | benign | -0.611 | Destabilizing | 0.031 | N | 0.461 | neutral | D | 0.566035845 | None | None | N |
V/M | 0.2842 | likely_benign | 0.2468 | benign | -0.406 | Destabilizing | 0.826 | D | 0.67 | neutral | None | None | None | None | N |
V/N | 0.8827 | likely_pathogenic | 0.8462 | pathogenic | -0.732 | Destabilizing | 0.967 | D | 0.857 | deleterious | None | None | None | None | N |
V/P | 0.8495 | likely_pathogenic | 0.85 | pathogenic | -0.821 | Destabilizing | 0.967 | D | 0.839 | deleterious | None | None | None | None | N |
V/Q | 0.8789 | likely_pathogenic | 0.8503 | pathogenic | -0.893 | Destabilizing | 0.967 | D | 0.847 | deleterious | None | None | None | None | N |
V/R | 0.8759 | likely_pathogenic | 0.8449 | pathogenic | -0.571 | Destabilizing | 0.906 | D | 0.86 | deleterious | None | None | None | None | N |
V/S | 0.7159 | likely_pathogenic | 0.6527 | pathogenic | -1.194 | Destabilizing | 0.906 | D | 0.823 | deleterious | None | None | None | None | N |
V/T | 0.5242 | ambiguous | 0.468 | ambiguous | -1.088 | Destabilizing | 0.575 | D | 0.671 | neutral | None | None | None | None | N |
V/W | 0.9622 | likely_pathogenic | 0.9528 | pathogenic | -1.332 | Destabilizing | 0.991 | D | 0.825 | deleterious | None | None | None | None | N |
V/Y | 0.8657 | likely_pathogenic | 0.8298 | pathogenic | -1.036 | Destabilizing | 0.906 | D | 0.747 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.