Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21906 | 65941;65942;65943 | chr2:178583087;178583086;178583085 | chr2:179447814;179447813;179447812 |
N2AB | 20265 | 61018;61019;61020 | chr2:178583087;178583086;178583085 | chr2:179447814;179447813;179447812 |
N2A | 19338 | 58237;58238;58239 | chr2:178583087;178583086;178583085 | chr2:179447814;179447813;179447812 |
N2B | 12841 | 38746;38747;38748 | chr2:178583087;178583086;178583085 | chr2:179447814;179447813;179447812 |
Novex-1 | 12966 | 39121;39122;39123 | chr2:178583087;178583086;178583085 | chr2:179447814;179447813;179447812 |
Novex-2 | 13033 | 39322;39323;39324 | chr2:178583087;178583086;178583085 | chr2:179447814;179447813;179447812 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | rs1193931137 | None | 0.188 | N | 0.387 | 0.178 | 0.395894371353 | gnomAD-4.0.0 | 6.85319E-07 | None | None | None | None | N | None | 2.9924E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0712 | likely_benign | 0.0706 | benign | -0.343 | Destabilizing | None | N | 0.122 | neutral | N | 0.445400487 | None | None | N |
P/C | 0.5409 | ambiguous | 0.4539 | ambiguous | -0.513 | Destabilizing | 0.824 | D | 0.397 | neutral | None | None | None | None | N |
P/D | 0.3767 | ambiguous | 0.3326 | benign | -0.54 | Destabilizing | 0.149 | N | 0.347 | neutral | None | None | None | None | N |
P/E | 0.2188 | likely_benign | 0.1977 | benign | -0.652 | Destabilizing | 0.081 | N | 0.319 | neutral | None | None | None | None | N |
P/F | 0.4927 | ambiguous | 0.415 | ambiguous | -0.664 | Destabilizing | 0.38 | N | 0.423 | neutral | None | None | None | None | N |
P/G | 0.2715 | likely_benign | 0.2389 | benign | -0.453 | Destabilizing | 0.081 | N | 0.338 | neutral | None | None | None | None | N |
P/H | 0.2083 | likely_benign | 0.1637 | benign | -0.111 | Destabilizing | 0.698 | D | 0.371 | neutral | None | None | None | None | N |
P/I | 0.2643 | likely_benign | 0.2355 | benign | -0.197 | Destabilizing | 0.081 | N | 0.416 | neutral | None | None | None | None | N |
P/K | 0.2485 | likely_benign | 0.2113 | benign | -0.434 | Destabilizing | 0.081 | N | 0.306 | neutral | None | None | None | None | N |
P/L | 0.1034 | likely_benign | 0.0902 | benign | -0.197 | Destabilizing | None | N | 0.217 | neutral | N | 0.461698091 | None | None | N |
P/M | 0.2341 | likely_benign | 0.2109 | benign | -0.395 | Destabilizing | 0.38 | N | 0.383 | neutral | None | None | None | None | N |
P/N | 0.2546 | likely_benign | 0.224 | benign | -0.131 | Destabilizing | 0.38 | N | 0.393 | neutral | None | None | None | None | N |
P/Q | 0.1302 | likely_benign | 0.1068 | benign | -0.373 | Destabilizing | 0.001 | N | 0.198 | neutral | N | 0.470008143 | None | None | N |
P/R | 0.1913 | likely_benign | 0.1565 | benign | 0.05 | Stabilizing | 0.188 | N | 0.387 | neutral | N | 0.482188007 | None | None | N |
P/S | 0.1216 | likely_benign | 0.1116 | benign | -0.392 | Destabilizing | 0.062 | N | 0.331 | neutral | N | 0.424926428 | None | None | N |
P/T | 0.0929 | likely_benign | 0.086 | benign | -0.413 | Destabilizing | 0.117 | N | 0.324 | neutral | N | 0.458772429 | None | None | N |
P/V | 0.1645 | likely_benign | 0.1532 | benign | -0.214 | Destabilizing | 0.035 | N | 0.348 | neutral | None | None | None | None | N |
P/W | 0.6461 | likely_pathogenic | 0.538 | ambiguous | -0.773 | Destabilizing | 0.935 | D | 0.442 | neutral | None | None | None | None | N |
P/Y | 0.408 | ambiguous | 0.345 | ambiguous | -0.464 | Destabilizing | 0.555 | D | 0.419 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.