Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21920 | 65983;65984;65985 | chr2:178583045;178583044;178583043 | chr2:179447772;179447771;179447770 |
N2AB | 20279 | 61060;61061;61062 | chr2:178583045;178583044;178583043 | chr2:179447772;179447771;179447770 |
N2A | 19352 | 58279;58280;58281 | chr2:178583045;178583044;178583043 | chr2:179447772;179447771;179447770 |
N2B | 12855 | 38788;38789;38790 | chr2:178583045;178583044;178583043 | chr2:179447772;179447771;179447770 |
Novex-1 | 12980 | 39163;39164;39165 | chr2:178583045;178583044;178583043 | chr2:179447772;179447771;179447770 |
Novex-2 | 13047 | 39364;39365;39366 | chr2:178583045;178583044;178583043 | chr2:179447772;179447771;179447770 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.001 | N | 0.287 | 0.255 | 0.26547132957 | gnomAD-4.0.0 | 1.59705E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43868E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1038 | likely_benign | 0.0953 | benign | -0.992 | Destabilizing | 0.003 | N | 0.146 | neutral | N | 0.481884149 | None | None | N |
T/C | 0.3125 | likely_benign | 0.2914 | benign | -0.749 | Destabilizing | 0.942 | D | 0.517 | neutral | None | None | None | None | N |
T/D | 0.6055 | likely_pathogenic | 0.5847 | pathogenic | -1.662 | Destabilizing | 0.273 | N | 0.437 | neutral | None | None | None | None | N |
T/E | 0.3705 | ambiguous | 0.3616 | ambiguous | -1.482 | Destabilizing | 0.236 | N | 0.401 | neutral | None | None | None | None | N |
T/F | 0.2293 | likely_benign | 0.2163 | benign | -0.639 | Destabilizing | 0.002 | N | 0.414 | neutral | None | None | None | None | N |
T/G | 0.3184 | likely_benign | 0.3073 | benign | -1.412 | Destabilizing | 0.134 | N | 0.431 | neutral | None | None | None | None | N |
T/H | 0.1628 | likely_benign | 0.1509 | benign | -1.685 | Destabilizing | 0.842 | D | 0.541 | neutral | None | None | None | None | N |
T/I | 0.1735 | likely_benign | 0.1551 | benign | 0.103 | Stabilizing | 0.001 | N | 0.287 | neutral | N | 0.489658271 | None | None | N |
T/K | 0.1157 | likely_benign | 0.1186 | benign | -0.741 | Destabilizing | 0.236 | N | 0.396 | neutral | None | None | None | None | N |
T/L | 0.1079 | likely_benign | 0.0955 | benign | 0.103 | Stabilizing | 0.001 | N | 0.249 | neutral | None | None | None | None | N |
T/M | 0.0983 | likely_benign | 0.0909 | benign | 0.212 | Stabilizing | 0.012 | N | 0.291 | neutral | None | None | None | None | N |
T/N | 0.1485 | likely_benign | 0.1461 | benign | -1.424 | Destabilizing | 0.002 | N | 0.241 | neutral | N | 0.49048499 | None | None | N |
T/P | 0.5697 | likely_pathogenic | 0.5296 | ambiguous | -0.229 | Destabilizing | 0.534 | D | 0.52 | neutral | N | 0.498804424 | None | None | N |
T/Q | 0.1713 | likely_benign | 0.1668 | benign | -1.196 | Destabilizing | 0.428 | N | 0.513 | neutral | None | None | None | None | N |
T/R | 0.0975 | likely_benign | 0.0975 | benign | -0.951 | Destabilizing | 0.428 | N | 0.483 | neutral | None | None | None | None | N |
T/S | 0.1038 | likely_benign | 0.1006 | benign | -1.555 | Destabilizing | 0.009 | N | 0.235 | neutral | N | 0.421526337 | None | None | N |
T/V | 0.1398 | likely_benign | 0.126 | benign | -0.229 | Destabilizing | 0.063 | N | 0.363 | neutral | None | None | None | None | N |
T/W | 0.5717 | likely_pathogenic | 0.5594 | ambiguous | -0.87 | Destabilizing | 0.984 | D | 0.546 | neutral | None | None | None | None | N |
T/Y | 0.2422 | likely_benign | 0.2354 | benign | -0.492 | Destabilizing | 0.273 | N | 0.533 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.