Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21937 | 66034;66035;66036 | chr2:178582994;178582993;178582992 | chr2:179447721;179447720;179447719 |
N2AB | 20296 | 61111;61112;61113 | chr2:178582994;178582993;178582992 | chr2:179447721;179447720;179447719 |
N2A | 19369 | 58330;58331;58332 | chr2:178582994;178582993;178582992 | chr2:179447721;179447720;179447719 |
N2B | 12872 | 38839;38840;38841 | chr2:178582994;178582993;178582992 | chr2:179447721;179447720;179447719 |
Novex-1 | 12997 | 39214;39215;39216 | chr2:178582994;178582993;178582992 | chr2:179447721;179447720;179447719 |
Novex-2 | 13064 | 39415;39416;39417 | chr2:178582994;178582993;178582992 | chr2:179447721;179447720;179447719 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs969062428 | None | 0.76 | N | 0.625 | 0.214 | 0.324436698001 | gnomAD-4.0.0 | 1.70846E-06 | None | None | None | None | N | None | 0 | 2.51813E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1171 | likely_benign | 0.108 | benign | -1.007 | Destabilizing | 0.76 | D | 0.625 | neutral | N | 0.487378304 | None | None | N |
T/C | 0.3719 | ambiguous | 0.3339 | benign | -0.903 | Destabilizing | 0.999 | D | 0.79 | deleterious | None | None | None | None | N |
T/D | 0.5741 | likely_pathogenic | 0.5502 | ambiguous | -1.316 | Destabilizing | 0.998 | D | 0.812 | deleterious | None | None | None | None | N |
T/E | 0.3405 | ambiguous | 0.3284 | benign | -1.244 | Destabilizing | 0.993 | D | 0.796 | deleterious | None | None | None | None | N |
T/F | 0.2203 | likely_benign | 0.2045 | benign | -1.047 | Destabilizing | 0.993 | D | 0.844 | deleterious | None | None | None | None | N |
T/G | 0.4501 | ambiguous | 0.4207 | ambiguous | -1.308 | Destabilizing | 0.993 | D | 0.792 | deleterious | None | None | None | None | N |
T/H | 0.2505 | likely_benign | 0.2259 | benign | -1.625 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
T/I | 0.105 | likely_benign | 0.1004 | benign | -0.272 | Destabilizing | 0.322 | N | 0.499 | neutral | N | 0.469048138 | None | None | N |
T/K | 0.2453 | likely_benign | 0.2379 | benign | -0.778 | Destabilizing | 0.993 | D | 0.804 | deleterious | None | None | None | None | N |
T/L | 0.0866 | likely_benign | 0.0821 | benign | -0.272 | Destabilizing | 0.807 | D | 0.681 | prob.neutral | None | None | None | None | N |
T/M | 0.0769 | likely_benign | 0.0761 | benign | -0.023 | Destabilizing | 0.993 | D | 0.813 | deleterious | None | None | None | None | N |
T/N | 0.2123 | likely_benign | 0.203 | benign | -1.087 | Destabilizing | 0.997 | D | 0.766 | deleterious | N | 0.516012579 | None | None | N |
T/P | 0.8726 | likely_pathogenic | 0.8647 | pathogenic | -0.486 | Destabilizing | 0.997 | D | 0.834 | deleterious | N | 0.515397287 | None | None | N |
T/Q | 0.2482 | likely_benign | 0.2363 | benign | -1.214 | Destabilizing | 0.998 | D | 0.823 | deleterious | None | None | None | None | N |
T/R | 0.2026 | likely_benign | 0.1818 | benign | -0.645 | Destabilizing | 0.998 | D | 0.833 | deleterious | None | None | None | None | N |
T/S | 0.1535 | likely_benign | 0.1448 | benign | -1.263 | Destabilizing | 0.969 | D | 0.613 | neutral | N | 0.502640637 | None | None | N |
T/V | 0.0984 | likely_benign | 0.0941 | benign | -0.486 | Destabilizing | 0.06 | N | 0.495 | neutral | None | None | None | None | N |
T/W | 0.5787 | likely_pathogenic | 0.5473 | ambiguous | -1.059 | Destabilizing | 0.999 | D | 0.804 | deleterious | None | None | None | None | N |
T/Y | 0.2966 | likely_benign | 0.2788 | benign | -0.739 | Destabilizing | 0.998 | D | 0.844 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.