Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21950 | 66073;66074;66075 | chr2:178582955;178582954;178582953 | chr2:179447682;179447681;179447680 |
N2AB | 20309 | 61150;61151;61152 | chr2:178582955;178582954;178582953 | chr2:179447682;179447681;179447680 |
N2A | 19382 | 58369;58370;58371 | chr2:178582955;178582954;178582953 | chr2:179447682;179447681;179447680 |
N2B | 12885 | 38878;38879;38880 | chr2:178582955;178582954;178582953 | chr2:179447682;179447681;179447680 |
Novex-1 | 13010 | 39253;39254;39255 | chr2:178582955;178582954;178582953 | chr2:179447682;179447681;179447680 |
Novex-2 | 13077 | 39454;39455;39456 | chr2:178582955;178582954;178582953 | chr2:179447682;179447681;179447680 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.235 | N | 0.302 | 0.111 | 0.324161360171 | gnomAD-4.0.0 | 1.81447E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.86588E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4754 | ambiguous | 0.436 | ambiguous | -0.489 | Destabilizing | 0.983 | D | 0.621 | neutral | None | None | None | None | N |
K/C | 0.6852 | likely_pathogenic | 0.6302 | pathogenic | -0.533 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
K/D | 0.8459 | likely_pathogenic | 0.8003 | pathogenic | 0.05 | Stabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | N |
K/E | 0.4092 | ambiguous | 0.369 | ambiguous | 0.121 | Stabilizing | 0.977 | D | 0.565 | neutral | N | 0.457038846 | None | None | N |
K/F | 0.8398 | likely_pathogenic | 0.8157 | pathogenic | -0.391 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/G | 0.6805 | likely_pathogenic | 0.6369 | pathogenic | -0.806 | Destabilizing | 0.998 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/H | 0.28 | likely_benign | 0.2583 | benign | -1.213 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
K/I | 0.4828 | ambiguous | 0.4338 | ambiguous | 0.308 | Stabilizing | 0.998 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/L | 0.4781 | ambiguous | 0.4418 | ambiguous | 0.308 | Stabilizing | 0.995 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/M | 0.3088 | likely_benign | 0.2801 | benign | 0.268 | Stabilizing | 1.0 | D | 0.692 | prob.neutral | N | 0.504219504 | None | None | N |
K/N | 0.5915 | likely_pathogenic | 0.5548 | ambiguous | -0.215 | Destabilizing | 0.993 | D | 0.686 | prob.neutral | N | 0.470240217 | None | None | N |
K/P | 0.7696 | likely_pathogenic | 0.7498 | pathogenic | 0.073 | Stabilizing | 0.999 | D | 0.74 | deleterious | None | None | None | None | N |
K/Q | 0.1389 | likely_benign | 0.1337 | benign | -0.386 | Destabilizing | 0.993 | D | 0.69 | prob.neutral | N | 0.457406992 | None | None | N |
K/R | 0.0931 | likely_benign | 0.0915 | benign | -0.466 | Destabilizing | 0.235 | N | 0.302 | neutral | N | 0.468528063 | None | None | N |
K/S | 0.5261 | ambiguous | 0.4952 | ambiguous | -0.904 | Destabilizing | 0.983 | D | 0.625 | neutral | None | None | None | None | N |
K/T | 0.2146 | likely_benign | 0.1932 | benign | -0.64 | Destabilizing | 0.997 | D | 0.713 | prob.delet. | N | 0.456540201 | None | None | N |
K/V | 0.4568 | ambiguous | 0.4182 | ambiguous | 0.073 | Stabilizing | 0.998 | D | 0.738 | prob.delet. | None | None | None | None | N |
K/W | 0.8333 | likely_pathogenic | 0.8091 | pathogenic | -0.243 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
K/Y | 0.7537 | likely_pathogenic | 0.7132 | pathogenic | 0.071 | Stabilizing | 0.999 | D | 0.734 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.