Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21989 | 66190;66191;66192 | chr2:178582491;178582490;178582489 | chr2:179447218;179447217;179447216 |
N2AB | 20348 | 61267;61268;61269 | chr2:178582491;178582490;178582489 | chr2:179447218;179447217;179447216 |
N2A | 19421 | 58486;58487;58488 | chr2:178582491;178582490;178582489 | chr2:179447218;179447217;179447216 |
N2B | 12924 | 38995;38996;38997 | chr2:178582491;178582490;178582489 | chr2:179447218;179447217;179447216 |
Novex-1 | 13049 | 39370;39371;39372 | chr2:178582491;178582490;178582489 | chr2:179447218;179447217;179447216 |
Novex-2 | 13116 | 39571;39572;39573 | chr2:178582491;178582490;178582489 | chr2:179447218;179447217;179447216 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1183678109 | -0.637 | 0.958 | N | 0.443 | 0.453 | 0.33835085245 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
T/A | rs1183678109 | -0.637 | 0.958 | N | 0.443 | 0.453 | 0.33835085245 | gnomAD-4.0.0 | 1.59323E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43377E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2293 | likely_benign | 0.2138 | benign | -0.642 | Destabilizing | 0.958 | D | 0.443 | neutral | N | 0.503630956 | None | None | I |
T/C | 0.6959 | likely_pathogenic | 0.6296 | pathogenic | -0.362 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | I |
T/D | 0.7797 | likely_pathogenic | 0.7473 | pathogenic | -0.39 | Destabilizing | 0.991 | D | 0.694 | prob.neutral | None | None | None | None | I |
T/E | 0.6105 | likely_pathogenic | 0.5796 | pathogenic | -0.438 | Destabilizing | 0.938 | D | 0.599 | neutral | None | None | None | None | I |
T/F | 0.6295 | likely_pathogenic | 0.5766 | pathogenic | -0.93 | Destabilizing | 0.998 | D | 0.824 | deleterious | None | None | None | None | I |
T/G | 0.5281 | ambiguous | 0.4891 | ambiguous | -0.838 | Destabilizing | 0.991 | D | 0.705 | prob.neutral | None | None | None | None | I |
T/H | 0.5906 | likely_pathogenic | 0.5456 | ambiguous | -1.174 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | I |
T/I | 0.4064 | ambiguous | 0.3418 | ambiguous | -0.226 | Destabilizing | 0.994 | D | 0.787 | deleterious | N | 0.515366713 | None | None | I |
T/K | 0.4425 | ambiguous | 0.4196 | ambiguous | -0.661 | Destabilizing | 0.938 | D | 0.663 | neutral | None | None | None | None | I |
T/L | 0.2102 | likely_benign | 0.1865 | benign | -0.226 | Destabilizing | 0.968 | D | 0.598 | neutral | None | None | None | None | I |
T/M | 0.1635 | likely_benign | 0.1445 | benign | 0.209 | Stabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | I |
T/N | 0.3375 | likely_benign | 0.3096 | benign | -0.508 | Destabilizing | 0.988 | D | 0.679 | prob.neutral | N | 0.497389986 | None | None | I |
T/P | 0.8655 | likely_pathogenic | 0.8472 | pathogenic | -0.335 | Destabilizing | 0.994 | D | 0.787 | deleterious | D | 0.534865943 | None | None | I |
T/Q | 0.4181 | ambiguous | 0.4068 | ambiguous | -0.806 | Destabilizing | 0.484 | N | 0.365 | neutral | None | None | None | None | I |
T/R | 0.423 | ambiguous | 0.3916 | ambiguous | -0.308 | Destabilizing | 0.982 | D | 0.773 | deleterious | None | None | None | None | I |
T/S | 0.1833 | likely_benign | 0.1736 | benign | -0.729 | Destabilizing | 0.958 | D | 0.411 | neutral | N | 0.503552209 | None | None | I |
T/V | 0.3154 | likely_benign | 0.2628 | benign | -0.335 | Destabilizing | 0.968 | D | 0.533 | neutral | None | None | None | None | I |
T/W | 0.8753 | likely_pathogenic | 0.8578 | pathogenic | -0.86 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
T/Y | 0.7039 | likely_pathogenic | 0.6607 | pathogenic | -0.62 | Destabilizing | 0.998 | D | 0.829 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.