Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21993 | 66202;66203;66204 | chr2:178582479;178582478;178582477 | chr2:179447206;179447205;179447204 |
N2AB | 20352 | 61279;61280;61281 | chr2:178582479;178582478;178582477 | chr2:179447206;179447205;179447204 |
N2A | 19425 | 58498;58499;58500 | chr2:178582479;178582478;178582477 | chr2:179447206;179447205;179447204 |
N2B | 12928 | 39007;39008;39009 | chr2:178582479;178582478;178582477 | chr2:179447206;179447205;179447204 |
Novex-1 | 13053 | 39382;39383;39384 | chr2:178582479;178582478;178582477 | chr2:179447206;179447205;179447204 |
Novex-2 | 13120 | 39583;39584;39585 | chr2:178582479;178582478;178582477 | chr2:179447206;179447205;179447204 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1483586965 | None | 0.104 | D | 0.573 | 0.462 | 0.656662538205 | gnomAD-4.0.0 | 1.59318E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86136E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9182 | likely_pathogenic | 0.8719 | pathogenic | -2.46 | Highly Destabilizing | 0.104 | N | 0.573 | neutral | D | 0.530614707 | None | None | N |
V/C | 0.9816 | likely_pathogenic | 0.972 | pathogenic | -2.14 | Highly Destabilizing | 0.968 | D | 0.783 | deleterious | None | None | None | None | N |
V/D | 0.9996 | likely_pathogenic | 0.9993 | pathogenic | -3.499 | Highly Destabilizing | 0.667 | D | 0.873 | deleterious | D | 0.554087786 | None | None | N |
V/E | 0.998 | likely_pathogenic | 0.9968 | pathogenic | -3.202 | Highly Destabilizing | 0.726 | D | 0.809 | deleterious | None | None | None | None | N |
V/F | 0.9434 | likely_pathogenic | 0.9278 | pathogenic | -1.396 | Destabilizing | 0.497 | N | 0.709 | prob.delet. | D | 0.542477991 | None | None | N |
V/G | 0.9859 | likely_pathogenic | 0.9805 | pathogenic | -3.061 | Highly Destabilizing | 0.667 | D | 0.837 | deleterious | D | 0.554087786 | None | None | N |
V/H | 0.9993 | likely_pathogenic | 0.999 | pathogenic | -2.941 | Highly Destabilizing | 0.968 | D | 0.877 | deleterious | None | None | None | None | N |
V/I | 0.0733 | likely_benign | 0.0733 | benign | -0.724 | Destabilizing | None | N | 0.152 | neutral | N | 0.475002957 | None | None | N |
V/K | 0.9977 | likely_pathogenic | 0.9968 | pathogenic | -2.127 | Highly Destabilizing | 0.726 | D | 0.811 | deleterious | None | None | None | None | N |
V/L | 0.5998 | likely_pathogenic | 0.4868 | ambiguous | -0.724 | Destabilizing | None | N | 0.298 | neutral | N | 0.485358811 | None | None | N |
V/M | 0.8032 | likely_pathogenic | 0.7426 | pathogenic | -1.003 | Destabilizing | 0.567 | D | 0.635 | neutral | None | None | None | None | N |
V/N | 0.9986 | likely_pathogenic | 0.9978 | pathogenic | -2.73 | Highly Destabilizing | 0.89 | D | 0.878 | deleterious | None | None | None | None | N |
V/P | 0.9979 | likely_pathogenic | 0.9958 | pathogenic | -1.282 | Destabilizing | 0.89 | D | 0.849 | deleterious | None | None | None | None | N |
V/Q | 0.9972 | likely_pathogenic | 0.9961 | pathogenic | -2.421 | Highly Destabilizing | 0.89 | D | 0.871 | deleterious | None | None | None | None | N |
V/R | 0.9952 | likely_pathogenic | 0.9932 | pathogenic | -2.097 | Highly Destabilizing | 0.726 | D | 0.876 | deleterious | None | None | None | None | N |
V/S | 0.9908 | likely_pathogenic | 0.9852 | pathogenic | -3.281 | Highly Destabilizing | 0.726 | D | 0.762 | deleterious | None | None | None | None | N |
V/T | 0.9324 | likely_pathogenic | 0.8894 | pathogenic | -2.83 | Highly Destabilizing | 0.272 | N | 0.585 | neutral | None | None | None | None | N |
V/W | 0.9989 | likely_pathogenic | 0.9984 | pathogenic | -2.029 | Highly Destabilizing | 0.968 | D | 0.859 | deleterious | None | None | None | None | N |
V/Y | 0.9967 | likely_pathogenic | 0.9954 | pathogenic | -1.697 | Destabilizing | 0.726 | D | 0.745 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.