Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2201 | 6826;6827;6828 | chr2:178775110;178775109;178775108 | chr2:179639837;179639836;179639835 |
N2AB | 2201 | 6826;6827;6828 | chr2:178775110;178775109;178775108 | chr2:179639837;179639836;179639835 |
N2A | 2201 | 6826;6827;6828 | chr2:178775110;178775109;178775108 | chr2:179639837;179639836;179639835 |
N2B | 2155 | 6688;6689;6690 | chr2:178775110;178775109;178775108 | chr2:179639837;179639836;179639835 |
Novex-1 | 2155 | 6688;6689;6690 | chr2:178775110;178775109;178775108 | chr2:179639837;179639836;179639835 |
Novex-2 | 2155 | 6688;6689;6690 | chr2:178775110;178775109;178775108 | chr2:179639837;179639836;179639835 |
Novex-3 | 2201 | 6826;6827;6828 | chr2:178775110;178775109;178775108 | chr2:179639837;179639836;179639835 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs763426070 | -1.095 | 1.0 | N | 0.793 | 0.418 | 0.119812018005 | gnomAD-2.1.1 | 7.97E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.53E-05 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2548 | likely_benign | 0.2925 | benign | -1.115 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | N | 0.340960968 | None | None | N |
P/C | 0.9474 | likely_pathogenic | 0.9558 | pathogenic | -0.786 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
P/D | 0.8952 | likely_pathogenic | 0.9142 | pathogenic | -0.602 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
P/E | 0.8338 | likely_pathogenic | 0.8599 | pathogenic | -0.633 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
P/F | 0.9289 | likely_pathogenic | 0.9412 | pathogenic | -0.903 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
P/G | 0.7861 | likely_pathogenic | 0.8198 | pathogenic | -1.377 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
P/H | 0.7142 | likely_pathogenic | 0.7457 | pathogenic | -0.773 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
P/I | 0.7906 | likely_pathogenic | 0.8311 | pathogenic | -0.524 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
P/K | 0.9007 | likely_pathogenic | 0.9177 | pathogenic | -0.868 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
P/L | 0.4533 | ambiguous | 0.5009 | ambiguous | -0.524 | Destabilizing | 1.0 | D | 0.746 | deleterious | D | 0.532895108 | None | None | N |
P/M | 0.7753 | likely_pathogenic | 0.8143 | pathogenic | -0.484 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
P/N | 0.791 | likely_pathogenic | 0.8246 | pathogenic | -0.648 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
P/Q | 0.652 | likely_pathogenic | 0.6978 | pathogenic | -0.82 | Destabilizing | 1.0 | D | 0.789 | deleterious | N | 0.461285783 | None | None | N |
P/R | 0.7568 | likely_pathogenic | 0.7851 | pathogenic | -0.335 | Destabilizing | 1.0 | D | 0.765 | deleterious | N | 0.461517121 | None | None | N |
P/S | 0.481 | ambiguous | 0.5304 | ambiguous | -1.158 | Destabilizing | 1.0 | D | 0.793 | deleterious | N | 0.389362171 | None | None | N |
P/T | 0.4433 | ambiguous | 0.5001 | ambiguous | -1.075 | Destabilizing | 1.0 | D | 0.789 | deleterious | N | 0.430478974 | None | None | N |
P/V | 0.6522 | likely_pathogenic | 0.7036 | pathogenic | -0.685 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
P/W | 0.967 | likely_pathogenic | 0.9723 | pathogenic | -1.02 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
P/Y | 0.8901 | likely_pathogenic | 0.9049 | pathogenic | -0.737 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.