Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22018 | 66277;66278;66279 | chr2:178582404;178582403;178582402 | chr2:179447131;179447130;179447129 |
N2AB | 20377 | 61354;61355;61356 | chr2:178582404;178582403;178582402 | chr2:179447131;179447130;179447129 |
N2A | 19450 | 58573;58574;58575 | chr2:178582404;178582403;178582402 | chr2:179447131;179447130;179447129 |
N2B | 12953 | 39082;39083;39084 | chr2:178582404;178582403;178582402 | chr2:179447131;179447130;179447129 |
Novex-1 | 13078 | 39457;39458;39459 | chr2:178582404;178582403;178582402 | chr2:179447131;179447130;179447129 |
Novex-2 | 13145 | 39658;39659;39660 | chr2:178582404;178582403;178582402 | chr2:179447131;179447130;179447129 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs727503579 | -0.374 | 0.014 | N | 0.29 | 0.031 | 0.245660935333 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.67E-05 | 0 |
E/D | rs727503579 | -0.374 | 0.014 | N | 0.29 | 0.031 | 0.245660935333 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/D | rs727503579 | -0.374 | 0.014 | N | 0.29 | 0.031 | 0.245660935333 | gnomAD-4.0.0 | 2.48027E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.30692E-05 | 0 | 1.60251E-05 |
E/G | None | None | 0.822 | N | 0.672 | 0.322 | 0.342631996419 | gnomAD-4.0.0 | 1.20038E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31257E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3869 | ambiguous | 0.3624 | ambiguous | -0.69 | Destabilizing | 0.698 | D | 0.612 | neutral | N | 0.51821223 | None | None | N |
E/C | 0.9555 | likely_pathogenic | 0.9437 | pathogenic | -0.323 | Destabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | N |
E/D | 0.1846 | likely_benign | 0.1714 | benign | -0.692 | Destabilizing | 0.014 | N | 0.29 | neutral | N | 0.466321972 | None | None | N |
E/F | 0.9367 | likely_pathogenic | 0.9318 | pathogenic | -0.276 | Destabilizing | 0.978 | D | 0.769 | deleterious | None | None | None | None | N |
E/G | 0.3206 | likely_benign | 0.2922 | benign | -0.971 | Destabilizing | 0.822 | D | 0.672 | neutral | N | 0.476269607 | None | None | N |
E/H | 0.7919 | likely_pathogenic | 0.7642 | pathogenic | -0.252 | Destabilizing | 0.998 | D | 0.568 | neutral | None | None | None | None | N |
E/I | 0.7368 | likely_pathogenic | 0.7344 | pathogenic | 0.049 | Stabilizing | 0.915 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/K | 0.4892 | ambiguous | 0.4623 | ambiguous | -0.163 | Destabilizing | 0.822 | D | 0.512 | neutral | N | 0.440135448 | None | None | N |
E/L | 0.7092 | likely_pathogenic | 0.6996 | pathogenic | 0.049 | Stabilizing | 0.754 | D | 0.659 | neutral | None | None | None | None | N |
E/M | 0.7706 | likely_pathogenic | 0.7591 | pathogenic | 0.268 | Stabilizing | 0.994 | D | 0.755 | deleterious | None | None | None | None | N |
E/N | 0.4939 | ambiguous | 0.4601 | ambiguous | -0.612 | Destabilizing | 0.956 | D | 0.549 | neutral | None | None | None | None | N |
E/P | 0.6435 | likely_pathogenic | 0.5745 | pathogenic | -0.177 | Destabilizing | 0.978 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/Q | 0.291 | likely_benign | 0.2604 | benign | -0.531 | Destabilizing | 0.97 | D | 0.56 | neutral | N | 0.463647026 | None | None | N |
E/R | 0.6385 | likely_pathogenic | 0.6064 | pathogenic | 0.145 | Stabilizing | 0.956 | D | 0.587 | neutral | None | None | None | None | N |
E/S | 0.3834 | ambiguous | 0.359 | ambiguous | -0.816 | Destabilizing | 0.754 | D | 0.496 | neutral | None | None | None | None | N |
E/T | 0.4101 | ambiguous | 0.3942 | ambiguous | -0.586 | Destabilizing | 0.019 | N | 0.355 | neutral | None | None | None | None | N |
E/V | 0.5189 | ambiguous | 0.5139 | ambiguous | -0.177 | Destabilizing | 0.125 | N | 0.382 | neutral | N | 0.474845455 | None | None | N |
E/W | 0.9694 | likely_pathogenic | 0.9666 | pathogenic | -0.024 | Destabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | N |
E/Y | 0.8791 | likely_pathogenic | 0.8678 | pathogenic | -0.023 | Destabilizing | 0.993 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.