Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22031 | 66316;66317;66318 | chr2:178582365;178582364;178582363 | chr2:179447092;179447091;179447090 |
N2AB | 20390 | 61393;61394;61395 | chr2:178582365;178582364;178582363 | chr2:179447092;179447091;179447090 |
N2A | 19463 | 58612;58613;58614 | chr2:178582365;178582364;178582363 | chr2:179447092;179447091;179447090 |
N2B | 12966 | 39121;39122;39123 | chr2:178582365;178582364;178582363 | chr2:179447092;179447091;179447090 |
Novex-1 | 13091 | 39496;39497;39498 | chr2:178582365;178582364;178582363 | chr2:179447092;179447091;179447090 |
Novex-2 | 13158 | 39697;39698;39699 | chr2:178582365;178582364;178582363 | chr2:179447092;179447091;179447090 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/S | rs1437140291 | -2.078 | 0.002 | N | 0.388 | 0.261 | 0.424908009808 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 2.87853E-04 | 0 | 0 |
C/S | rs1437140291 | -2.078 | 0.002 | N | 0.388 | 0.261 | 0.424908009808 | gnomAD-4.0.0 | 1.5977E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88523E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.3804 | ambiguous | 0.357 | ambiguous | -1.635 | Destabilizing | 0.002 | N | 0.193 | neutral | None | None | None | None | N |
C/D | 0.9159 | likely_pathogenic | 0.9088 | pathogenic | -1.711 | Destabilizing | 0.561 | D | 0.719 | prob.delet. | None | None | None | None | N |
C/E | 0.895 | likely_pathogenic | 0.8844 | pathogenic | -1.494 | Destabilizing | 0.561 | D | 0.727 | prob.delet. | None | None | None | None | N |
C/F | 0.2527 | likely_benign | 0.2523 | benign | -1.019 | Destabilizing | 0.873 | D | 0.728 | prob.delet. | N | 0.385762246 | None | None | N |
C/G | 0.3189 | likely_benign | 0.2797 | benign | -1.972 | Destabilizing | 0.166 | N | 0.729 | prob.delet. | N | 0.460182647 | None | None | N |
C/H | 0.4558 | ambiguous | 0.4573 | ambiguous | -2.285 | Highly Destabilizing | 0.901 | D | 0.733 | prob.delet. | None | None | None | None | N |
C/I | 0.6309 | likely_pathogenic | 0.6351 | pathogenic | -0.732 | Destabilizing | 0.561 | D | 0.697 | prob.neutral | None | None | None | None | N |
C/K | 0.7737 | likely_pathogenic | 0.7832 | pathogenic | -1.404 | Destabilizing | 0.209 | N | 0.711 | prob.delet. | None | None | None | None | N |
C/L | 0.4984 | ambiguous | 0.4792 | ambiguous | -0.732 | Destabilizing | 0.345 | N | 0.683 | prob.neutral | None | None | None | None | N |
C/M | 0.5401 | ambiguous | 0.5308 | ambiguous | -0.083 | Destabilizing | 0.965 | D | 0.697 | prob.neutral | None | None | None | None | N |
C/N | 0.6481 | likely_pathogenic | 0.6201 | pathogenic | -1.889 | Destabilizing | 0.561 | D | 0.723 | prob.delet. | None | None | None | None | N |
C/P | 0.9979 | likely_pathogenic | 0.9975 | pathogenic | -1.01 | Destabilizing | 0.722 | D | 0.735 | prob.delet. | None | None | None | None | N |
C/Q | 0.5074 | ambiguous | 0.5208 | ambiguous | -1.459 | Destabilizing | 0.561 | D | 0.737 | prob.delet. | None | None | None | None | N |
C/R | 0.3577 | ambiguous | 0.3711 | ambiguous | -1.737 | Destabilizing | 0.003 | N | 0.601 | neutral | N | 0.311128414 | None | None | N |
C/S | 0.211 | likely_benign | 0.203 | benign | -2.175 | Highly Destabilizing | 0.002 | N | 0.388 | neutral | N | 0.316190304 | None | None | N |
C/T | 0.4266 | ambiguous | 0.4031 | ambiguous | -1.789 | Destabilizing | 0.209 | N | 0.681 | prob.neutral | None | None | None | None | N |
C/V | 0.5 | ambiguous | 0.5116 | ambiguous | -1.01 | Destabilizing | 0.209 | N | 0.681 | prob.neutral | None | None | None | None | N |
C/W | 0.6018 | likely_pathogenic | 0.6134 | pathogenic | -1.475 | Destabilizing | 0.987 | D | 0.707 | prob.neutral | N | 0.471573076 | None | None | N |
C/Y | 0.3687 | ambiguous | 0.3691 | ambiguous | -1.251 | Destabilizing | 0.954 | D | 0.717 | prob.delet. | N | 0.396381884 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.