Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22044 | 66355;66356;66357 | chr2:178582326;178582325;178582324 | chr2:179447053;179447052;179447051 |
N2AB | 20403 | 61432;61433;61434 | chr2:178582326;178582325;178582324 | chr2:179447053;179447052;179447051 |
N2A | 19476 | 58651;58652;58653 | chr2:178582326;178582325;178582324 | chr2:179447053;179447052;179447051 |
N2B | 12979 | 39160;39161;39162 | chr2:178582326;178582325;178582324 | chr2:179447053;179447052;179447051 |
Novex-1 | 13104 | 39535;39536;39537 | chr2:178582326;178582325;178582324 | chr2:179447053;179447052;179447051 |
Novex-2 | 13171 | 39736;39737;39738 | chr2:178582326;178582325;178582324 | chr2:179447053;179447052;179447051 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1490431835 | None | 0.518 | N | 0.703 | 0.376 | 0.354396617058 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/P | None | None | 0.938 | N | 0.651 | 0.205 | 0.370240404367 | gnomAD-4.0.0 | 1.62513E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.90877E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.3115 | likely_benign | 0.3869 | ambiguous | -0.771 | Destabilizing | 0.028 | N | 0.375 | neutral | N | 0.519839531 | None | None | N |
T/C | 0.6933 | likely_pathogenic | 0.7399 | pathogenic | -0.402 | Destabilizing | 0.996 | D | 0.641 | neutral | None | None | None | None | N |
T/D | 0.9719 | likely_pathogenic | 0.9605 | pathogenic | -0.85 | Destabilizing | 0.909 | D | 0.68 | prob.neutral | None | None | None | None | N |
T/E | 0.9733 | likely_pathogenic | 0.9684 | pathogenic | -0.637 | Destabilizing | 0.74 | D | 0.671 | prob.neutral | None | None | None | None | N |
T/F | 0.9462 | likely_pathogenic | 0.956 | pathogenic | -0.47 | Destabilizing | 0.953 | D | 0.673 | prob.neutral | None | None | None | None | N |
T/G | 0.6735 | likely_pathogenic | 0.6551 | pathogenic | -1.194 | Destabilizing | 0.587 | D | 0.699 | prob.delet. | None | None | None | None | N |
T/H | 0.9416 | likely_pathogenic | 0.9272 | pathogenic | -1.222 | Destabilizing | 0.996 | D | 0.691 | prob.delet. | None | None | None | None | N |
T/I | 0.8244 | likely_pathogenic | 0.8914 | pathogenic | 0.337 | Stabilizing | 0.518 | D | 0.703 | prob.delet. | N | 0.509238535 | None | None | N |
T/K | 0.9757 | likely_pathogenic | 0.9728 | pathogenic | -0.061 | Destabilizing | 0.909 | D | 0.67 | prob.neutral | None | None | None | None | N |
T/L | 0.4968 | ambiguous | 0.5878 | pathogenic | 0.337 | Stabilizing | 0.587 | D | 0.674 | prob.neutral | None | None | None | None | N |
T/M | 0.3989 | ambiguous | 0.4775 | ambiguous | 0.132 | Stabilizing | 0.987 | D | 0.636 | neutral | None | None | None | None | N |
T/N | 0.812 | likely_pathogenic | 0.7924 | pathogenic | -0.781 | Destabilizing | 0.883 | D | 0.64 | neutral | N | 0.495327568 | None | None | N |
T/P | 0.9075 | likely_pathogenic | 0.882 | pathogenic | -0.001 | Destabilizing | 0.938 | D | 0.651 | prob.neutral | N | 0.484804237 | None | None | N |
T/Q | 0.9402 | likely_pathogenic | 0.9367 | pathogenic | -0.506 | Destabilizing | 0.909 | D | 0.664 | prob.neutral | None | None | None | None | N |
T/R | 0.9656 | likely_pathogenic | 0.9621 | pathogenic | -0.351 | Destabilizing | 0.909 | D | 0.64 | neutral | None | None | None | None | N |
T/S | 0.2028 | likely_benign | 0.1864 | benign | -1.045 | Destabilizing | 0.028 | N | 0.455 | neutral | N | 0.399894697 | None | None | N |
T/V | 0.624 | likely_pathogenic | 0.7379 | pathogenic | -0.001 | Destabilizing | 0.037 | N | 0.465 | neutral | None | None | None | None | N |
T/W | 0.989 | likely_pathogenic | 0.9877 | pathogenic | -0.648 | Destabilizing | 0.996 | D | 0.723 | deleterious | None | None | None | None | N |
T/Y | 0.9709 | likely_pathogenic | 0.9717 | pathogenic | -0.198 | Destabilizing | 0.984 | D | 0.658 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.