Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22047 | 66364;66365;66366 | chr2:178582317;178582316;178582315 | chr2:179447044;179447043;179447042 |
N2AB | 20406 | 61441;61442;61443 | chr2:178582317;178582316;178582315 | chr2:179447044;179447043;179447042 |
N2A | 19479 | 58660;58661;58662 | chr2:178582317;178582316;178582315 | chr2:179447044;179447043;179447042 |
N2B | 12982 | 39169;39170;39171 | chr2:178582317;178582316;178582315 | chr2:179447044;179447043;179447042 |
Novex-1 | 13107 | 39544;39545;39546 | chr2:178582317;178582316;178582315 | chr2:179447044;179447043;179447042 |
Novex-2 | 13174 | 39745;39746;39747 | chr2:178582317;178582316;178582315 | chr2:179447044;179447043;179447042 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | 0.361 | N | 0.54 | 0.082 | 0.29132392195 | gnomAD-4.0.0 | 1.65944E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.89689E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3245 | likely_benign | 0.2547 | benign | -0.757 | Destabilizing | 0.842 | D | 0.593 | neutral | None | None | None | None | N |
A/D | 0.5868 | likely_pathogenic | 0.417 | ambiguous | -1.447 | Destabilizing | 0.842 | D | 0.68 | prob.neutral | None | None | None | None | N |
A/E | 0.387 | ambiguous | 0.2689 | benign | -1.4 | Destabilizing | 0.361 | N | 0.621 | neutral | N | 0.480971711 | None | None | N |
A/F | 0.3653 | ambiguous | 0.2449 | benign | -0.832 | Destabilizing | 0.724 | D | 0.667 | prob.neutral | None | None | None | None | N |
A/G | 0.2272 | likely_benign | 0.1727 | benign | -1.241 | Destabilizing | 0.534 | D | 0.549 | neutral | N | 0.511294618 | None | None | N |
A/H | 0.5331 | ambiguous | 0.396 | ambiguous | -1.393 | Destabilizing | 0.953 | D | 0.589 | neutral | None | None | None | None | N |
A/I | 0.1722 | likely_benign | 0.1167 | benign | -0.131 | Destabilizing | 0.01 | N | 0.367 | neutral | None | None | None | None | N |
A/K | 0.558 | ambiguous | 0.3779 | ambiguous | -1.271 | Destabilizing | 0.272 | N | 0.605 | neutral | None | None | None | None | N |
A/L | 0.1823 | likely_benign | 0.1293 | benign | -0.131 | Destabilizing | 0.063 | N | 0.503 | neutral | None | None | None | None | N |
A/M | 0.1884 | likely_benign | 0.1338 | benign | -0.104 | Destabilizing | 0.724 | D | 0.663 | prob.neutral | None | None | None | None | N |
A/N | 0.4167 | ambiguous | 0.2868 | benign | -1.136 | Destabilizing | 0.724 | D | 0.669 | prob.neutral | None | None | None | None | N |
A/P | 0.9458 | likely_pathogenic | 0.9123 | pathogenic | -0.349 | Destabilizing | 0.924 | D | 0.707 | prob.delet. | N | 0.492612857 | None | None | N |
A/Q | 0.3607 | ambiguous | 0.2603 | benign | -1.188 | Destabilizing | 0.724 | D | 0.697 | prob.delet. | None | None | None | None | N |
A/R | 0.5066 | ambiguous | 0.3507 | ambiguous | -0.983 | Destabilizing | 0.002 | N | 0.427 | neutral | None | None | None | None | N |
A/S | 0.1222 | likely_benign | 0.1033 | benign | -1.495 | Destabilizing | 0.361 | N | 0.54 | neutral | N | 0.466367618 | None | None | N |
A/T | 0.0813 | likely_benign | 0.0668 | benign | -1.342 | Destabilizing | 0.189 | N | 0.497 | neutral | N | 0.461519159 | None | None | N |
A/V | 0.0892 | likely_benign | 0.069 | benign | -0.349 | Destabilizing | None | N | 0.167 | neutral | N | 0.356023703 | None | None | N |
A/W | 0.8046 | likely_pathogenic | 0.6847 | pathogenic | -1.322 | Destabilizing | 0.984 | D | 0.724 | deleterious | None | None | None | None | N |
A/Y | 0.5268 | ambiguous | 0.3843 | ambiguous | -0.843 | Destabilizing | 0.842 | D | 0.627 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.