Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2205 | 6838;6839;6840 | chr2:178775098;178775097;178775096 | chr2:179639825;179639824;179639823 |
N2AB | 2205 | 6838;6839;6840 | chr2:178775098;178775097;178775096 | chr2:179639825;179639824;179639823 |
N2A | 2205 | 6838;6839;6840 | chr2:178775098;178775097;178775096 | chr2:179639825;179639824;179639823 |
N2B | 2159 | 6700;6701;6702 | chr2:178775098;178775097;178775096 | chr2:179639825;179639824;179639823 |
Novex-1 | 2159 | 6700;6701;6702 | chr2:178775098;178775097;178775096 | chr2:179639825;179639824;179639823 |
Novex-2 | 2159 | 6700;6701;6702 | chr2:178775098;178775097;178775096 | chr2:179639825;179639824;179639823 |
Novex-3 | 2205 | 6838;6839;6840 | chr2:178775098;178775097;178775096 | chr2:179639825;179639824;179639823 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs2154345518 | None | 1.0 | D | 0.749 | 0.722 | 0.760968267486 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.9253E-04 | None | 0 | 0 | 0 | 0 | 0 |
V/M | rs2154345518 | None | 1.0 | D | 0.749 | 0.722 | 0.760968267486 | gnomAD-4.0.0 | 6.56556E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.92976E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.676 | likely_pathogenic | 0.6881 | pathogenic | -1.862 | Destabilizing | 0.999 | D | 0.664 | neutral | D | 0.610517078 | None | None | N |
V/C | 0.9453 | likely_pathogenic | 0.9421 | pathogenic | -0.98 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
V/D | 0.993 | likely_pathogenic | 0.9941 | pathogenic | -2.428 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
V/E | 0.9809 | likely_pathogenic | 0.984 | pathogenic | -2.299 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.759446366 | None | None | N |
V/F | 0.8297 | likely_pathogenic | 0.8476 | pathogenic | -1.282 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
V/G | 0.7926 | likely_pathogenic | 0.8113 | pathogenic | -2.271 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | D | 0.609787616 | None | None | N |
V/H | 0.9948 | likely_pathogenic | 0.9955 | pathogenic | -1.941 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/I | 0.1535 | likely_benign | 0.1543 | benign | -0.758 | Destabilizing | 0.998 | D | 0.643 | neutral | None | None | None | None | N |
V/K | 0.9865 | likely_pathogenic | 0.9884 | pathogenic | -1.676 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
V/L | 0.7134 | likely_pathogenic | 0.7086 | pathogenic | -0.758 | Destabilizing | 0.997 | D | 0.685 | prob.neutral | D | 0.65591182 | None | None | N |
V/M | 0.6315 | likely_pathogenic | 0.6435 | pathogenic | -0.451 | Destabilizing | 1.0 | D | 0.749 | deleterious | D | 0.700459701 | None | None | N |
V/N | 0.973 | likely_pathogenic | 0.9753 | pathogenic | -1.719 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
V/P | 0.9461 | likely_pathogenic | 0.9534 | pathogenic | -1.099 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
V/Q | 0.9805 | likely_pathogenic | 0.9829 | pathogenic | -1.746 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
V/R | 0.9805 | likely_pathogenic | 0.983 | pathogenic | -1.25 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
V/S | 0.9044 | likely_pathogenic | 0.9128 | pathogenic | -2.186 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
V/T | 0.7483 | likely_pathogenic | 0.759 | pathogenic | -1.951 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
V/W | 0.9961 | likely_pathogenic | 0.9967 | pathogenic | -1.737 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/Y | 0.9829 | likely_pathogenic | 0.9853 | pathogenic | -1.363 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.