Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22080 | 66463;66464;66465 | chr2:178582131;178582130;178582129 | chr2:179446858;179446857;179446856 |
N2AB | 20439 | 61540;61541;61542 | chr2:178582131;178582130;178582129 | chr2:179446858;179446857;179446856 |
N2A | 19512 | 58759;58760;58761 | chr2:178582131;178582130;178582129 | chr2:179446858;179446857;179446856 |
N2B | 13015 | 39268;39269;39270 | chr2:178582131;178582130;178582129 | chr2:179446858;179446857;179446856 |
Novex-1 | 13140 | 39643;39644;39645 | chr2:178582131;178582130;178582129 | chr2:179446858;179446857;179446856 |
Novex-2 | 13207 | 39844;39845;39846 | chr2:178582131;178582130;178582129 | chr2:179446858;179446857;179446856 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.565 | N | 0.41 | 0.143 | 0.290222751274 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4365 | ambiguous | 0.4006 | ambiguous | -0.715 | Destabilizing | 0.996 | D | 0.439 | neutral | None | None | None | None | N |
A/D | 0.2612 | likely_benign | 0.2505 | benign | -0.562 | Destabilizing | 0.858 | D | 0.481 | neutral | None | None | None | None | N |
A/E | 0.2031 | likely_benign | 0.205 | benign | -0.725 | Destabilizing | 0.018 | N | 0.244 | neutral | N | 0.412698131 | None | None | N |
A/F | 0.3578 | ambiguous | 0.3453 | ambiguous | -0.939 | Destabilizing | 0.961 | D | 0.623 | neutral | None | None | None | None | N |
A/G | 0.1404 | likely_benign | 0.1385 | benign | -0.21 | Destabilizing | 0.565 | D | 0.407 | neutral | N | 0.479328555 | None | None | N |
A/H | 0.4064 | ambiguous | 0.4059 | ambiguous | -0.281 | Destabilizing | 0.989 | D | 0.609 | neutral | None | None | None | None | N |
A/I | 0.158 | likely_benign | 0.1593 | benign | -0.37 | Destabilizing | 0.858 | D | 0.391 | neutral | None | None | None | None | N |
A/K | 0.2926 | likely_benign | 0.3094 | benign | -0.533 | Destabilizing | 0.633 | D | 0.424 | neutral | None | None | None | None | N |
A/L | 0.1303 | likely_benign | 0.1309 | benign | -0.37 | Destabilizing | 0.633 | D | 0.431 | neutral | None | None | None | None | N |
A/M | 0.1736 | likely_benign | 0.176 | benign | -0.445 | Destabilizing | 0.989 | D | 0.484 | neutral | None | None | None | None | N |
A/N | 0.2038 | likely_benign | 0.207 | benign | -0.173 | Destabilizing | 0.858 | D | 0.614 | neutral | None | None | None | None | N |
A/P | 0.1805 | likely_benign | 0.1905 | benign | -0.285 | Destabilizing | 0.949 | D | 0.478 | neutral | N | 0.481982071 | None | None | N |
A/Q | 0.2342 | likely_benign | 0.2471 | benign | -0.471 | Destabilizing | 0.858 | D | 0.478 | neutral | None | None | None | None | N |
A/R | 0.3257 | likely_benign | 0.3218 | benign | -0.08 | Destabilizing | 0.923 | D | 0.477 | neutral | None | None | None | None | N |
A/S | 0.0909 | likely_benign | 0.0909 | benign | -0.327 | Destabilizing | 0.075 | N | 0.175 | neutral | N | 0.437268502 | None | None | N |
A/T | 0.0747 | likely_benign | 0.0779 | benign | -0.421 | Destabilizing | 0.565 | D | 0.41 | neutral | N | 0.472381153 | None | None | N |
A/V | 0.0934 | likely_benign | 0.0979 | benign | -0.285 | Destabilizing | 0.018 | N | 0.183 | neutral | N | 0.477808402 | None | None | N |
A/W | 0.7004 | likely_pathogenic | 0.6679 | pathogenic | -1.053 | Destabilizing | 0.996 | D | 0.696 | prob.neutral | None | None | None | None | N |
A/Y | 0.4539 | ambiguous | 0.4351 | ambiguous | -0.716 | Destabilizing | 0.987 | D | 0.61 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.