Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22081 | 66466;66467;66468 | chr2:178582128;178582127;178582126 | chr2:179446855;179446854;179446853 |
N2AB | 20440 | 61543;61544;61545 | chr2:178582128;178582127;178582126 | chr2:179446855;179446854;179446853 |
N2A | 19513 | 58762;58763;58764 | chr2:178582128;178582127;178582126 | chr2:179446855;179446854;179446853 |
N2B | 13016 | 39271;39272;39273 | chr2:178582128;178582127;178582126 | chr2:179446855;179446854;179446853 |
Novex-1 | 13141 | 39646;39647;39648 | chr2:178582128;178582127;178582126 | chr2:179446855;179446854;179446853 |
Novex-2 | 13208 | 39847;39848;39849 | chr2:178582128;178582127;178582126 | chr2:179446855;179446854;179446853 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | None | None | 0.427 | N | 0.362 | 0.109 | 0.237489013734 | gnomAD-4.0.0 | 1.36929E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7993E-06 | 0 | 0 |
D/N | None | None | None | N | 0.052 | 0.105 | 0.18995819373 | gnomAD-4.0.0 | 6.84646E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99651E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.204 | likely_benign | 0.1637 | benign | -0.166 | Destabilizing | 0.042 | N | 0.383 | neutral | N | 0.512803623 | None | None | N |
D/C | 0.626 | likely_pathogenic | 0.4772 | ambiguous | 0.27 | Stabilizing | 0.958 | D | 0.416 | neutral | None | None | None | None | N |
D/E | 0.1834 | likely_benign | 0.1654 | benign | -0.253 | Destabilizing | 0.081 | N | 0.247 | neutral | N | 0.500335758 | None | None | N |
D/F | 0.5446 | ambiguous | 0.4392 | ambiguous | -0.311 | Destabilizing | 0.331 | N | 0.457 | neutral | None | None | None | None | N |
D/G | 0.276 | likely_benign | 0.2071 | benign | -0.326 | Destabilizing | 0.042 | N | 0.321 | neutral | N | 0.516113287 | None | None | N |
D/H | 0.3023 | likely_benign | 0.22 | benign | -0.189 | Destabilizing | 0.427 | N | 0.362 | neutral | N | 0.508032522 | None | None | N |
D/I | 0.3985 | ambiguous | 0.2908 | benign | 0.194 | Stabilizing | 0.046 | N | 0.462 | neutral | None | None | None | None | N |
D/K | 0.4587 | ambiguous | 0.3454 | ambiguous | 0.524 | Stabilizing | 0.124 | N | 0.347 | neutral | None | None | None | None | N |
D/L | 0.4353 | ambiguous | 0.3463 | ambiguous | 0.194 | Stabilizing | 0.124 | N | 0.421 | neutral | None | None | None | None | N |
D/M | 0.5999 | likely_pathogenic | 0.5034 | ambiguous | 0.382 | Stabilizing | 0.497 | N | 0.426 | neutral | None | None | None | None | N |
D/N | 0.098 | likely_benign | 0.0847 | benign | 0.332 | Stabilizing | None | N | 0.052 | neutral | N | 0.443154324 | None | None | N |
D/P | 0.947 | likely_pathogenic | 0.9124 | pathogenic | 0.095 | Stabilizing | 0.667 | D | 0.383 | neutral | None | None | None | None | N |
D/Q | 0.3726 | ambiguous | 0.2929 | benign | 0.333 | Stabilizing | 0.497 | N | 0.301 | neutral | None | None | None | None | N |
D/R | 0.5179 | ambiguous | 0.3656 | ambiguous | 0.556 | Stabilizing | 0.497 | N | 0.433 | neutral | None | None | None | None | N |
D/S | 0.1194 | likely_benign | 0.1045 | benign | 0.239 | Stabilizing | 0.002 | N | 0.065 | neutral | None | None | None | None | N |
D/T | 0.2208 | likely_benign | 0.1818 | benign | 0.361 | Stabilizing | 0.055 | N | 0.305 | neutral | None | None | None | None | N |
D/V | 0.2336 | likely_benign | 0.1762 | benign | 0.095 | Stabilizing | 0.001 | N | 0.35 | neutral | N | 0.479558311 | None | None | N |
D/W | 0.8861 | likely_pathogenic | 0.8162 | pathogenic | -0.248 | Destabilizing | 0.883 | D | 0.435 | neutral | None | None | None | None | N |
D/Y | 0.2226 | likely_benign | 0.1606 | benign | -0.081 | Destabilizing | 0.002 | N | 0.368 | neutral | N | 0.461972158 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.