Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2210 | 6853;6854;6855 | chr2:178775083;178775082;178775081 | chr2:179639810;179639809;179639808 |
N2AB | 2210 | 6853;6854;6855 | chr2:178775083;178775082;178775081 | chr2:179639810;179639809;179639808 |
N2A | 2210 | 6853;6854;6855 | chr2:178775083;178775082;178775081 | chr2:179639810;179639809;179639808 |
N2B | 2164 | 6715;6716;6717 | chr2:178775083;178775082;178775081 | chr2:179639810;179639809;179639808 |
Novex-1 | 2164 | 6715;6716;6717 | chr2:178775083;178775082;178775081 | chr2:179639810;179639809;179639808 |
Novex-2 | 2164 | 6715;6716;6717 | chr2:178775083;178775082;178775081 | chr2:179639810;179639809;179639808 |
Novex-3 | 2210 | 6853;6854;6855 | chr2:178775083;178775082;178775081 | chr2:179639810;179639809;179639808 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs2154345509 | None | 0.001 | N | 0.068 | 0.078 | 0.0482279557977 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1036 | likely_benign | 0.1021 | benign | -0.009 | Destabilizing | 0.334 | N | 0.353 | neutral | N | 0.423788125 | None | None | N |
D/C | 0.3556 | ambiguous | 0.3273 | benign | 0.191 | Stabilizing | 0.992 | D | 0.421 | neutral | None | None | None | None | N |
D/E | 0.1487 | likely_benign | 0.1445 | benign | -0.098 | Destabilizing | 0.334 | N | 0.246 | neutral | N | 0.32635131 | None | None | N |
D/F | 0.4046 | ambiguous | 0.4012 | ambiguous | -0.179 | Destabilizing | 0.972 | D | 0.425 | neutral | None | None | None | None | N |
D/G | 0.0757 | likely_benign | 0.0743 | benign | -0.155 | Destabilizing | 0.002 | N | 0.103 | neutral | N | 0.353459998 | None | None | N |
D/H | 0.1584 | likely_benign | 0.1543 | benign | 0.064 | Stabilizing | 0.81 | D | 0.351 | neutral | N | 0.425277675 | None | None | N |
D/I | 0.3474 | ambiguous | 0.3516 | ambiguous | 0.312 | Stabilizing | 0.92 | D | 0.449 | neutral | None | None | None | None | N |
D/K | 0.1949 | likely_benign | 0.1968 | benign | 0.415 | Stabilizing | 0.447 | N | 0.334 | neutral | None | None | None | None | N |
D/L | 0.2947 | likely_benign | 0.2914 | benign | 0.312 | Stabilizing | 0.766 | D | 0.427 | neutral | None | None | None | None | N |
D/M | 0.4446 | ambiguous | 0.4377 | ambiguous | 0.343 | Stabilizing | 0.992 | D | 0.409 | neutral | None | None | None | None | N |
D/N | 0.0526 | likely_benign | 0.0523 | benign | 0.39 | Stabilizing | 0.001 | N | 0.068 | neutral | N | 0.339241628 | None | None | N |
D/P | 0.8679 | likely_pathogenic | 0.8712 | pathogenic | 0.226 | Stabilizing | 0.92 | D | 0.355 | neutral | None | None | None | None | N |
D/Q | 0.2038 | likely_benign | 0.2006 | benign | 0.384 | Stabilizing | 0.85 | D | 0.299 | neutral | None | None | None | None | N |
D/R | 0.2078 | likely_benign | 0.2073 | benign | 0.526 | Stabilizing | 0.617 | D | 0.404 | neutral | None | None | None | None | N |
D/S | 0.0811 | likely_benign | 0.08 | benign | 0.232 | Stabilizing | 0.25 | N | 0.251 | neutral | None | None | None | None | N |
D/T | 0.2138 | likely_benign | 0.2106 | benign | 0.336 | Stabilizing | 0.617 | D | 0.318 | neutral | None | None | None | None | N |
D/V | 0.2213 | likely_benign | 0.2237 | benign | 0.226 | Stabilizing | 0.896 | D | 0.425 | neutral | N | 0.404560236 | None | None | N |
D/W | 0.7256 | likely_pathogenic | 0.7173 | pathogenic | -0.16 | Destabilizing | 0.992 | D | 0.497 | neutral | None | None | None | None | N |
D/Y | 0.133 | likely_benign | 0.1297 | benign | 0.036 | Stabilizing | 0.963 | D | 0.425 | neutral | N | 0.404560236 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.