Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22101 | 66526;66527;66528 | chr2:178582068;178582067;178582066 | chr2:179446795;179446794;179446793 |
N2AB | 20460 | 61603;61604;61605 | chr2:178582068;178582067;178582066 | chr2:179446795;179446794;179446793 |
N2A | 19533 | 58822;58823;58824 | chr2:178582068;178582067;178582066 | chr2:179446795;179446794;179446793 |
N2B | 13036 | 39331;39332;39333 | chr2:178582068;178582067;178582066 | chr2:179446795;179446794;179446793 |
Novex-1 | 13161 | 39706;39707;39708 | chr2:178582068;178582067;178582066 | chr2:179446795;179446794;179446793 |
Novex-2 | 13228 | 39907;39908;39909 | chr2:178582068;178582067;178582066 | chr2:179446795;179446794;179446793 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/Y | None | None | 0.954 | N | 0.304 | 0.33 | 0.519514513453 | gnomAD-4.0.0 | 2.05314E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69899E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.212 | likely_benign | 0.2318 | benign | -0.121 | Destabilizing | 0.002 | N | 0.18 | neutral | None | None | None | None | I |
N/C | 0.2643 | likely_benign | 0.2757 | benign | 0.184 | Stabilizing | 0.991 | D | 0.291 | neutral | None | None | None | None | I |
N/D | 0.3446 | ambiguous | 0.3563 | ambiguous | 0.217 | Stabilizing | 0.491 | N | 0.281 | neutral | N | 0.437863147 | None | None | I |
N/E | 0.5935 | likely_pathogenic | 0.6206 | pathogenic | 0.175 | Stabilizing | 0.345 | N | 0.247 | neutral | None | None | None | None | I |
N/F | 0.4887 | ambiguous | 0.4893 | ambiguous | -0.669 | Destabilizing | 0.965 | D | 0.314 | neutral | None | None | None | None | I |
N/G | 0.276 | likely_benign | 0.2946 | benign | -0.243 | Destabilizing | 0.209 | N | 0.257 | neutral | None | None | None | None | I |
N/H | 0.1283 | likely_benign | 0.1235 | benign | -0.24 | Destabilizing | 0.873 | D | 0.262 | neutral | N | 0.478288405 | None | None | I |
N/I | 0.1935 | likely_benign | 0.2065 | benign | 0.104 | Stabilizing | 0.772 | D | 0.345 | neutral | N | 0.497220882 | None | None | I |
N/K | 0.4781 | ambiguous | 0.5223 | ambiguous | 0.113 | Stabilizing | 0.166 | N | 0.265 | neutral | N | 0.444213117 | None | None | I |
N/L | 0.2162 | likely_benign | 0.2221 | benign | 0.104 | Stabilizing | 0.561 | D | 0.313 | neutral | None | None | None | None | I |
N/M | 0.3131 | likely_benign | 0.3236 | benign | 0.045 | Stabilizing | 0.965 | D | 0.3 | neutral | None | None | None | None | I |
N/P | 0.6531 | likely_pathogenic | 0.6685 | pathogenic | 0.053 | Stabilizing | 0.722 | D | 0.351 | neutral | None | None | None | None | I |
N/Q | 0.3663 | ambiguous | 0.3902 | ambiguous | -0.16 | Destabilizing | 0.561 | D | 0.237 | neutral | None | None | None | None | I |
N/R | 0.4832 | ambiguous | 0.5083 | ambiguous | 0.163 | Stabilizing | 0.004 | N | 0.219 | neutral | None | None | None | None | I |
N/S | 0.0909 | likely_benign | 0.0946 | benign | 0.002 | Stabilizing | 0.005 | N | 0.085 | neutral | N | 0.453235245 | None | None | I |
N/T | 0.1174 | likely_benign | 0.1258 | benign | 0.081 | Stabilizing | 0.005 | N | 0.097 | neutral | N | 0.423896559 | None | None | I |
N/V | 0.2016 | likely_benign | 0.2149 | benign | 0.053 | Stabilizing | 0.39 | N | 0.317 | neutral | None | None | None | None | I |
N/W | 0.7795 | likely_pathogenic | 0.7697 | pathogenic | -0.798 | Destabilizing | 0.991 | D | 0.323 | neutral | None | None | None | None | I |
N/Y | 0.1774 | likely_benign | 0.1689 | benign | -0.471 | Destabilizing | 0.954 | D | 0.304 | neutral | N | 0.500895906 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.