Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22118 | 66577;66578;66579 | chr2:178582017;178582016;178582015 | chr2:179446744;179446743;179446742 |
N2AB | 20477 | 61654;61655;61656 | chr2:178582017;178582016;178582015 | chr2:179446744;179446743;179446742 |
N2A | 19550 | 58873;58874;58875 | chr2:178582017;178582016;178582015 | chr2:179446744;179446743;179446742 |
N2B | 13053 | 39382;39383;39384 | chr2:178582017;178582016;178582015 | chr2:179446744;179446743;179446742 |
Novex-1 | 13178 | 39757;39758;39759 | chr2:178582017;178582016;178582015 | chr2:179446744;179446743;179446742 |
Novex-2 | 13245 | 39958;39959;39960 | chr2:178582017;178582016;178582015 | chr2:179446744;179446743;179446742 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.001 | N | 0.139 | 0.058 | 0.117506650769 | gnomAD-4.0.0 | 1.59217E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86036E-06 | 0 | 0 |
T/I | rs751985481 | 0.053 | 0.213 | N | 0.442 | 0.142 | None | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0743 | likely_benign | 0.0802 | benign | -0.634 | Destabilizing | 0.001 | N | 0.139 | neutral | N | 0.506131154 | None | None | N |
T/C | 0.4177 | ambiguous | 0.4457 | ambiguous | -0.386 | Destabilizing | 0.951 | D | 0.497 | neutral | None | None | None | None | N |
T/D | 0.5643 | likely_pathogenic | 0.6087 | pathogenic | -0.15 | Destabilizing | 0.418 | N | 0.454 | neutral | None | None | None | None | N |
T/E | 0.4853 | ambiguous | 0.5193 | ambiguous | -0.174 | Destabilizing | 0.264 | N | 0.438 | neutral | None | None | None | None | N |
T/F | 0.3267 | likely_benign | 0.3659 | ambiguous | -0.788 | Destabilizing | 0.836 | D | 0.495 | neutral | None | None | None | None | N |
T/G | 0.1592 | likely_benign | 0.1887 | benign | -0.861 | Destabilizing | 0.001 | N | 0.287 | neutral | None | None | None | None | N |
T/H | 0.3705 | ambiguous | 0.3823 | ambiguous | -1.095 | Destabilizing | 0.836 | D | 0.498 | neutral | None | None | None | None | N |
T/I | 0.2071 | likely_benign | 0.2423 | benign | -0.131 | Destabilizing | 0.213 | N | 0.442 | neutral | N | 0.470664904 | None | None | N |
T/K | 0.3615 | ambiguous | 0.363 | ambiguous | -0.739 | Destabilizing | 0.213 | N | 0.426 | neutral | N | 0.491353703 | None | None | N |
T/L | 0.1224 | likely_benign | 0.1363 | benign | -0.131 | Destabilizing | 0.129 | N | 0.407 | neutral | None | None | None | None | N |
T/M | 0.1155 | likely_benign | 0.1203 | benign | 0.039 | Stabilizing | 0.836 | D | 0.515 | neutral | None | None | None | None | N |
T/N | 0.1478 | likely_benign | 0.169 | benign | -0.577 | Destabilizing | 0.418 | N | 0.306 | neutral | None | None | None | None | N |
T/P | 0.1282 | likely_benign | 0.1343 | benign | -0.267 | Destabilizing | 0.523 | D | 0.541 | neutral | N | 0.513057126 | None | None | N |
T/Q | 0.2947 | likely_benign | 0.3101 | benign | -0.735 | Destabilizing | 0.022 | N | 0.283 | neutral | None | None | None | None | N |
T/R | 0.3659 | ambiguous | 0.3534 | ambiguous | -0.456 | Destabilizing | 0.213 | N | 0.533 | neutral | N | 0.509208745 | None | None | N |
T/S | 0.0984 | likely_benign | 0.1056 | benign | -0.804 | Destabilizing | 0.003 | N | 0.144 | neutral | N | 0.458702566 | None | None | N |
T/V | 0.1345 | likely_benign | 0.1536 | benign | -0.267 | Destabilizing | 0.01 | N | 0.183 | neutral | None | None | None | None | N |
T/W | 0.7035 | likely_pathogenic | 0.7333 | pathogenic | -0.769 | Destabilizing | 0.983 | D | 0.527 | neutral | None | None | None | None | N |
T/Y | 0.3853 | ambiguous | 0.417 | ambiguous | -0.536 | Destabilizing | 0.94 | D | 0.504 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.