Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22127 | 66604;66605;66606 | chr2:178581990;178581989;178581988 | chr2:179446717;179446716;179446715 |
N2AB | 20486 | 61681;61682;61683 | chr2:178581990;178581989;178581988 | chr2:179446717;179446716;179446715 |
N2A | 19559 | 58900;58901;58902 | chr2:178581990;178581989;178581988 | chr2:179446717;179446716;179446715 |
N2B | 13062 | 39409;39410;39411 | chr2:178581990;178581989;178581988 | chr2:179446717;179446716;179446715 |
Novex-1 | 13187 | 39784;39785;39786 | chr2:178581990;178581989;178581988 | chr2:179446717;179446716;179446715 |
Novex-2 | 13254 | 39985;39986;39987 | chr2:178581990;178581989;178581988 | chr2:179446717;179446716;179446715 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs1289473781 | -1.529 | 0.958 | N | 0.55 | 0.461 | 0.365317461125 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/A | rs1289473781 | -1.529 | 0.958 | N | 0.55 | 0.461 | 0.365317461125 | gnomAD-4.0.0 | 3.18454E-06 | None | None | None | None | N | None | 0 | 4.57436E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs1208330464 | -1.481 | 0.958 | N | 0.483 | 0.268 | 0.282575091529 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
E/D | rs1208330464 | -1.481 | 0.958 | N | 0.483 | 0.268 | 0.282575091529 | gnomAD-4.0.0 | 1.59227E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77793E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5508 | ambiguous | 0.5806 | pathogenic | -1.725 | Destabilizing | 0.958 | D | 0.55 | neutral | N | 0.483284976 | None | None | N |
E/C | 0.9418 | likely_pathogenic | 0.9473 | pathogenic | -0.897 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
E/D | 0.8546 | likely_pathogenic | 0.8172 | pathogenic | -1.561 | Destabilizing | 0.958 | D | 0.483 | neutral | N | 0.482728771 | None | None | N |
E/F | 0.9669 | likely_pathogenic | 0.9654 | pathogenic | -1.378 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
E/G | 0.8534 | likely_pathogenic | 0.8591 | pathogenic | -2.134 | Highly Destabilizing | 0.988 | D | 0.673 | neutral | N | 0.507011544 | None | None | N |
E/H | 0.9233 | likely_pathogenic | 0.9147 | pathogenic | -1.275 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/I | 0.6579 | likely_pathogenic | 0.6904 | pathogenic | -0.551 | Destabilizing | 0.995 | D | 0.832 | deleterious | None | None | None | None | N |
E/K | 0.7729 | likely_pathogenic | 0.7778 | pathogenic | -1.399 | Destabilizing | 0.919 | D | 0.503 | neutral | N | 0.506899158 | None | None | N |
E/L | 0.8116 | likely_pathogenic | 0.8168 | pathogenic | -0.551 | Destabilizing | 0.991 | D | 0.751 | deleterious | None | None | None | None | N |
E/M | 0.7649 | likely_pathogenic | 0.7835 | pathogenic | 0.213 | Stabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
E/N | 0.9117 | likely_pathogenic | 0.9035 | pathogenic | -1.65 | Destabilizing | 0.991 | D | 0.68 | prob.neutral | None | None | None | None | N |
E/P | 0.9988 | likely_pathogenic | 0.9988 | pathogenic | -0.928 | Destabilizing | 0.995 | D | 0.738 | prob.delet. | None | None | None | None | N |
E/Q | 0.2663 | likely_benign | 0.2759 | benign | -1.402 | Destabilizing | 0.414 | N | 0.348 | neutral | N | 0.444850622 | None | None | N |
E/R | 0.827 | likely_pathogenic | 0.8237 | pathogenic | -1.193 | Destabilizing | 0.982 | D | 0.676 | prob.neutral | None | None | None | None | N |
E/S | 0.7038 | likely_pathogenic | 0.7144 | pathogenic | -2.37 | Highly Destabilizing | 0.968 | D | 0.538 | neutral | None | None | None | None | N |
E/T | 0.6965 | likely_pathogenic | 0.722 | pathogenic | -1.977 | Destabilizing | 0.991 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/V | 0.5278 | ambiguous | 0.5545 | ambiguous | -0.928 | Destabilizing | 0.988 | D | 0.723 | prob.delet. | N | 0.467623029 | None | None | N |
E/W | 0.994 | likely_pathogenic | 0.9931 | pathogenic | -1.314 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
E/Y | 0.9586 | likely_pathogenic | 0.9547 | pathogenic | -1.128 | Destabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.